PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 601aa MW: 63744.5 Da PI: 10.8845

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98.6	5.3e-31	94	178	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1BG033940.7 94 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 178 8******************************************************************97..56668*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
QQQPQHQGGG PGQQFGLHTP EMPPFSPSRT TGQQRISMAE APSPISSRPP APGPPPQQQQ 60 QLNNELAGAG AVAFDEEALA AGEEGLGGGA GGNRWPRQET LALLKIRSDM DAAFRDATLK 120 GPLWEEVSRK LAEEGYRRNA KKCKEKFENV HKYYKRTKDS RAGRNDGKTY RFFRQLEAMQ 180 STAAPTASAP PPATAVGVPG VVVPTAGWPA DAGGGGQLEL LNVQHGGVLG RGRLRQRGHR 240 RHGRRRGRAR EEEEDVGRWR RGWFWRRRRE RQDDEVLRGA DEAGDGASGG DAAAVPGGHR 300 EAGAGPHDPR GGVAEAGDGA PGARAGDPRA GARHGCYPRR RCALLHTEDH RADHPHAVHR 360 RSGHYIHATA AAFAASRHAH SILRRASSGT TVVFAATCHA LAASTSTLAT AAEAANNAAR 420 DAAAAQVAGS SDATATAASA GRKFKLHGRR QRTGIVAVAQ DGGARADPTA EQPGHEVPRG 480 RAEGTALGRD LRRHAADGLQ PELQAVQGEV GEHQQVLQEG EGEQQEAARG LQDVPLLPPA 540 RGALPQQGGA RLPLRRWRRT GFAAARRARQ CSSTGAHRGV HRCSADLADG SAAATCGQER 600 R

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

QQQPQHQGGG PGQQFGLHTP EMPPFSPSRT TGQQRISMAE APSPISSRPP APGPPPQQQQ  60
QLNNELAGAG AVAFDEEALA AGEEGLGGGA GGNRWPRQET LALLKIRSDM DAAFRDATLK  120
GPLWEEVSRK LAEEGYRRNA KKCKEKFENV HKYYKRTKDS RAGRNDGKTY RFFRQLEAMQ  180
STAAPTASAP PPATAVGVPG VVVPTAGWPA DAGGGGQLEL LNVQHGGVLG RGRLRQRGHR  240
RHGRRRGRAR EEEEDVGRWR RGWFWRRRRE RQDDEVLRGA DEAGDGASGG DAAAVPGGHR  300
EAGAGPHDPR GGVAEAGDGA PGARAGDPRA GARHGCYPRR RCALLHTEDH RADHPHAVHR  360
RSGHYIHATA AAFAASRHAH SILRRASSGT TVVFAATCHA LAASTSTLAT AAEAANNAAR  420
DAAAAQVAGS SDATATAASA GRKFKLHGRR QRTGIVAVAQ DGGARADPTA EQPGHEVPRG  480
RAEGTALGRD LRRHAADGLQ PELQAVQGEV GEHQQVLQEG EGEQQEAARG LQDVPLLPPA  540
RGALPQQGGA RLPLRRWRRT GFAAARRARQ CSSTGAHRGV HRCSADLADG SAAATCGQER  600
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	4e-42	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.7