PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 603aa MW: 63037.6 Da PI: 9.7664

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98.6	5.3e-31	97	181	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1BG033940.6 97 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 181 8******************************************************************97..56668*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MQQQQQPQHQ GGGPGQQFGL HTPEMPPFSP SRTTGQQRIS MAEAPSPISS RPPAPGPPPQ 60 QQQQLNNELA GAGAVAFDEE ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA 120 TLKGPLWEEV SRKLAEEGYR RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE 180 AMQSTAAPTA SAPPPATAVG VPGVVVPTAV RPLAEPPPVG AAAAATAGLP TPVVVGNLSF 240 STSNTEEYSD EDDSDNEGTD DMGGGADERG KRKRTSEGGA AAGSGDGASG GDAAAVPGGH 300 REAGAGPHDP RGGVAEAGDG APGARAGDPR AGARHGCYPR RRCALLHTED HRADHPHAVH 360 RRSGHYIHAT AAAFAASRHA HSILRRASSG TTVVFAATCH ALAASTSTLA TAAEAANNAA 420 RDAAAAQLHG HRRGAPLRSS ARLVGVRRVR WRQRTGIVAV AQDGGARADP TAEQPGHEVP 480 RGRAEGTALG RDLRRHAADG LQPELQAVQG EVGEHQQVLQ EGEGEQQEAA RGLQDVPLLP 540 PARGALPQQG GARLPLRRWR RTGFAAARRA RQCSSTGAHR GVHRCSADLA DGSAAATCGQ 600 ERR

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MQQQQQPQHQ GGGPGQQFGL HTPEMPPFSP SRTTGQQRIS MAEAPSPISS RPPAPGPPPQ  60
QQQQLNNELA GAGAVAFDEE ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA  120
TLKGPLWEEV SRKLAEEGYR RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE  180
AMQSTAAPTA SAPPPATAVG VPGVVVPTAV RPLAEPPPVG AAAAATAGLP TPVVVGNLSF  240
STSNTEEYSD EDDSDNEGTD DMGGGADERG KRKRTSEGGA AAGSGDGASG GDAAAVPGGH  300
REAGAGPHDP RGGVAEAGDG APGARAGDPR AGARHGCYPR RRCALLHTED HRADHPHAVH  360
RRSGHYIHAT AAAFAASRHA HSILRRASSG TTVVFAATCH ALAASTSTLA TAAEAANNAA  420
RDAAAAQLHG HRRGAPLRSS ARLVGVRRVR WRQRTGIVAV AQDGGARADP TAEQPGHEVP  480
RGRAEGTALG RDLRRHAADG LQPELQAVQG EVGEHQQVLQ EGEGEQQEAA RGLQDVPLLP  540
PARGALPQQG GARLPLRRWR RTGFAAARRA RQCSSTGAHR GVHRCSADLA DGSAAATCGQ  600
ERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-41	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.6