PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 690aa MW: 73483.5 Da PI: 9.3291

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98.3	6.4e-31	102	186	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1BG033940.5 102 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 186 8******************************************************************97..56668*****85 PP
2	trihelix	109	3e-34	484	569	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1BG033940.5 484 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 569 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
PVCTSMQQQQ QPQHQGGGPG QQFGLHTPEM PPFSPSRTTG QQRISMAEAP SPISSRPPAP 60 GPPPQQQQQL NNELAGAGAV AFDEEALAAG EEGLGGGAGG NRWPRQETLA LLKIRSDMDA 120 AFRDATLKGP LWEEVSRKLA EEGYRRNAKK CKEKFENVHK YYKRTKDSRA GRNDGKTYRF 180 FRQLEAMQST AAPTASAPPP ATAVGVPGVV VPTAVRPLAE PPPVGAAAAA TAGLPTPVVV 240 GNLSFSTSNT EEYSDEDDSD NEGTDDMGGG ADERGKRKRT SEGGAAAGSG GDAGSGKMMR 300 FFEGLMKQVM ERQEAMQQRF LEAIEKREQD RMIREEAWRR QEMARLAREQ EILGQERAMA 360 ATRDAAVLSF IQKITGQTIP MPSIAAQAIT FMPPPPPSQP HATPIAYSAA PVPARPSSSQ 420 PPATHSPPQP QPSPRQQKPP TMPPVTPQPH KSCMDIVVAP PSEAPHDSSG YDGSGGGSGP 480 ASSRWPKTEV HALIQLRSNL DMRYQEAGPK GPLWEEISAG MRRMGYNRSS KRCKEKWENI 540 NKYFKKVKES NKKRPEDSKT CPYFHQLEAL YRNKAALGSP SGGGGALALP PPAEHANAAP 600 QERIEAFTVA APISQTAPQQ PPVAKNDASN AGNGNGNGGG VSAGVSGGVQ RLAASNGGSR 660 FVFSEAGGDA VAKKVIKLEN MCILGVAIAI

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

PVCTSMQQQQ QPQHQGGGPG QQFGLHTPEM PPFSPSRTTG QQRISMAEAP SPISSRPPAP  60
GPPPQQQQQL NNELAGAGAV AFDEEALAAG EEGLGGGAGG NRWPRQETLA LLKIRSDMDA  120
AFRDATLKGP LWEEVSRKLA EEGYRRNAKK CKEKFENVHK YYKRTKDSRA GRNDGKTYRF  180
FRQLEAMQST AAPTASAPPP ATAVGVPGVV VPTAVRPLAE PPPVGAAAAA TAGLPTPVVV  240
GNLSFSTSNT EEYSDEDDSD NEGTDDMGGG ADERGKRKRT SEGGAAAGSG GDAGSGKMMR  300
FFEGLMKQVM ERQEAMQQRF LEAIEKREQD RMIREEAWRR QEMARLAREQ EILGQERAMA  360
ATRDAAVLSF IQKITGQTIP MPSIAAQAIT FMPPPPPSQP HATPIAYSAA PVPARPSSSQ  420
PPATHSPPQP QPSPRQQKPP TMPPVTPQPH KSCMDIVVAP PSEAPHDSSG YDGSGGGSGP  480
ASSRWPKTEV HALIQLRSNL DMRYQEAGPK GPLWEEISAG MRRMGYNRSS KRCKEKWENI  540
NKYFKKVKES NKKRPEDSKT CPYFHQLEAL YRNKAALGSP SGGGGALALP PPAEHANAAP  600
QERIEAFTVA APISQTAPQQ PPVAKNDASN AGNGNGNGGG VSAGVSGGVQ RLAASNGGSR  660
FVFSEAGGDA VAKKVIKLEN MCILGVAIAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	5e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.5