PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 728aa MW: 77735.1 Da PI: 6.8542

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98.2	6.9e-31	11	95	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1BG033940.4 11 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 95 8******************************************************************97..56668*****85 PP
2	trihelix	108.9	3.2e-34	411	496	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1BG033940.4 411 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 496 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
EGLGGGAGGN RWPRQETLAL LKIRSDMDAA FRDATLKGPL WEEVSRKLAE EGYRRNAKKC 60 KEKFENVHKY YKRTKDSRAG RNDGKTYRFF RQLEAMQSTA APTASAPPPA TAVGVPGVVV 120 PTAVRPLAEP PPVGAAAAAT AGLPTPVVVG NLSFSTSNTE EYSDEDDSDN EGTDDMGGGA 180 DERGKRKRTS EGGAAAGSGG DAGSGKMMRF FEGLMKQVME RQEAMQQRFL EAIEKREQDR 240 MIREEAWRRQ EMARLAREQE ILGQERAMAA TRDAAVLSFI QKITGQTIPM PSIAAQAITF 300 MPPPPPSQPH ATPIAYSAAP VPARPSSSQP PATHSPPQPQ PSPRQQKPPT MPPVTPQPHK 360 SPAPATPQLQ QQAPVVNSSC MDIVVAPPSE APHDSSGYDG SGGGSGPASS RWPKTEVHAL 420 IQLRSNLDMR YQEAGPKGPL WEEISAGMRR MGYNRSSKRC KEKWENINKY FKKVKESNKK 480 RPEDSKTCPY FHQLEALYRN KAALGSPSGG GGALALPPPA EHANAAPQER IEAFTVAAPI 540 SQTAPQQPPV AKNDASNAGN GNGNGGGVSA GVSGGVQRLA ASNGGSRFVF SEAGGDAVAK 600 KPEGIMKETT MEQRQPQPQP QAAQQAAINS YNRTGGGGAE SDNMDEDDED EDDSEDEDEE 660 DDLDGNKTQY KIQFQGQQQH QNQHQQHHHN VVRPNATSSG GGNPPGAAAP SAPAAATTTA 720 GSFLGMVQ

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

EGLGGGAGGN RWPRQETLAL LKIRSDMDAA FRDATLKGPL WEEVSRKLAE EGYRRNAKKC  60
KEKFENVHKY YKRTKDSRAG RNDGKTYRFF RQLEAMQSTA APTASAPPPA TAVGVPGVVV  120
PTAVRPLAEP PPVGAAAAAT AGLPTPVVVG NLSFSTSNTE EYSDEDDSDN EGTDDMGGGA  180
DERGKRKRTS EGGAAAGSGG DAGSGKMMRF FEGLMKQVME RQEAMQQRFL EAIEKREQDR  240
MIREEAWRRQ EMARLAREQE ILGQERAMAA TRDAAVLSFI QKITGQTIPM PSIAAQAITF  300
MPPPPPSQPH ATPIAYSAAP VPARPSSSQP PATHSPPQPQ PSPRQQKPPT MPPVTPQPHK  360
SPAPATPQLQ QQAPVVNSSC MDIVVAPPSE APHDSSGYDG SGGGSGPASS RWPKTEVHAL  420
IQLRSNLDMR YQEAGPKGPL WEEISAGMRR MGYNRSSKRC KEKWENINKY FKKVKESNKK  480
RPEDSKTCPY FHQLEALYRN KAALGSPSGG GGALALPPPA EHANAAPQER IEAFTVAAPI  540
SQTAPQQPPV AKNDASNAGN GNGNGGGVSA GVSGGVQRLA ASNGGSRFVF SEAGGDAVAK  600
KPEGIMKETT MEQRQPQPQP QAAQQAAINS YNRTGGGGAE SDNMDEDDED EDDSEDEDEE  660
DDLDGNKTQY KIQFQGQQQH QNQHQQHHHN VVRPNATSSG GGNPPGAAAP SAPAAATTTA  720
GSFLGMVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	6e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.4