PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 372aa MW: 39238.8 Da PI: 5.8122

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	110.4	1.1e-34	54	139	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1BG033940.3 54 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 139 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
PHKSPAPATP QLQQQAPVVN SSCMDIVVAP PSEAPHDSSG YDGSGGGSGP ASSRWPKTEV 60 HALIQLRSNL DMRYQEAGPK GPLWEEISAG MRRMGYNRSS KRCKEKWENI NKYFKKVKES 120 NKKRPEDSKT CPYFHQLEAL YRNKAALGSP SGGGGALALP PPAEHANAAP QERIEAFTVA 180 APISQTAPQQ PPVAKNDASN AGNGNGNGGG VSAGVSGGVQ RLAASNGGSR FVFSEAGGDA 240 VAKKVPEGIM KETTMEQRQP QPQPQAAQQA AINSYNRTGG GGAESDNMDE DDEDEDDSED 300 EDEEDDLDGN KTQYKIQFQG QQQHQNQHQQ HHHNVVRPNA TSSGGGNPPG AAAPSAPAAA 360 TTTAGSFLGM VQ

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

PHKSPAPATP QLQQQAPVVN SSCMDIVVAP PSEAPHDSSG YDGSGGGSGP ASSRWPKTEV  60
HALIQLRSNL DMRYQEAGPK GPLWEEISAG MRRMGYNRSS KRCKEKWENI NKYFKKVKES  120
NKKRPEDSKT CPYFHQLEAL YRNKAALGSP SGGGGALALP PPAEHANAAP QERIEAFTVA  180
APISQTAPQQ PPVAKNDASN AGNGNGNGGG VSAGVSGGVQ RLAASNGGSR FVFSEAGGDA  240
VAKKVPEGIM KETTMEQRQP QPQPQAAQQA AINSYNRTGG GGAESDNMDE DDEDEDDSED  300
EDEEDDLDGN KTQYKIQFQG QQQHQNQHQQ HHHNVVRPNA TSSGGGNPPG AAAPSAPAAA  360
TTTAGSFLGM VQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-51	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.3