PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG033940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 233aa MW: 24373.2 Da PI: 9.8883 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 111.6 | 4.6e-35 | 40 | 125 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1BG033940.1 40 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 125 8*********************************************************************8.99***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
QAPVVNSSCM DIVVAPPSEA PHDSSGYDGS GGGSGPASSR WPKTEVHALI QLRSNLDMRY 60 QEAGPKGPLW EEISAGMRRM GYNRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF 120 HQLEALYRNK AALGSPSGGG GALALPPPAE HANAAPQERI EAFTVAAPIS QTAPQQPPVA 180 KNDASNAGNG NGNGGGVSAG VSGGVQRLAA SNGGSRFVFS EAGGDAVAKK KAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 5e-53 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG033940.1 |