PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG033190.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 291aa MW: 32478.5 Da PI: 5.0892 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.6 | 6.3e-21 | 119 | 243 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....................................tekerrtrae 57 Yn+YA ++GFs+++++s+ks+ +g+ k++fvC+k k++ ++ ++k+r++ + TRIDC1BG033190.2 119 HYNAYAMRLGFSIKMNTSRKSTLTGQLEKQQFVCTKFRKAKVDDGGaevaptldeipdicehaddddayddivfiddqcakkkKRKKRKRDTI 211 6***********************************999999988899********************************9877777788899 PP FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHela 90 +tgC+a+++vk++ dg wev+ + eHnH+l+ TRIDC1BG033190.2 212 VHTGCRARMVVKLK-DGWWEVIFFIAEHNHALV 243 9*************.****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MIDLNELHDD TNCEAPVRDA VGAQVPAYCT QPGASQTIGG CNEVVVESPN PTTVQRVAAQ 60 PEAIHADSDT FNDTTIVGET GGTIAQDGLG IDNDDEAWSQ PKEPTIGMRF NTLEGAQEHY 120 NAYAMRLGFS IKMNTSRKST LTGQLEKQQF VCTKFRKAKV DDGGAEVAPT LDEIPDICEH 180 ADDDDAYDDI VFIDDQCAKK KKRKKRKRDT IVHTGCRARM VVKLKDGWWE VIFFIAEHNH 240 ALVDKPSLTK YLRSHQGIPP EEKLFLTNLH NCNLTTGVCH VYYIYMPTFK E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 199 | 204 | KKKKRK |
2 | 199 | 205 | KKKKRKK |
3 | 199 | 206 | KKKKRKKR |
4 | 199 | 207 | KKKKRKKRK |
5 | 199 | 225 | KKKKRKKRKRDTIVHTGCRARMVVKLK |
6 | 200 | 206 | KKKKRKK |
7 | 200 | 208 | KKKKRKKRK |
8 | 201 | 207 | KKKKRKK |
9 | 201 | 205 | KKRKK |
10 | 202 | 208 | KKKKRKK |
11 | 203 | 208 | RKKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 7e-11 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG033190.2 |