PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG033190.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 291aa    MW: 32478.5 Da    PI: 5.0892
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG033190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR166.66.3e-21119243290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....................................tekerrtrae 57 
                        Yn+YA ++GFs+++++s+ks+ +g+  k++fvC+k  k++ ++                                       ++k+r++ + 
  TRIDC1BG033190.1 119 HYNAYAMRLGFSIKMNTSRKSTLTGQLEKQQFVCTKFRKAKVDDGGaevaptldeipdicehaddddayddivfiddqcakkkKRKKRKRDTI 211
                       6***********************************999999988899********************************9877777788899 PP

              FAR1  58 trtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +tgC+a+++vk++ dg wev+ +  eHnH+l+
  TRIDC1BG033190.1 212 VHTGCRARMVVKLK-DGWWEVIFFIAEHNHALV 243
                       9*************.****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MIDLNELHDD TNCEAPVRDA VGAQVPAYCT QPGASQTIGG CNEVVVESPN PTTVQRVAAQ  60
PEAIHADSDT FNDTTIVGET GGTIAQDGLG IDNDDEAWSQ PKEPTIGMRF NTLEGAQEHY  120
NAYAMRLGFS IKMNTSRKST LTGQLEKQQF VCTKFRKAKV DDGGAEVAPT LDEIPDICEH  180
ADDDDAYDDI VFIDDQCAKK KKRKKRKRDT IVHTGCRARM VVKLKDGWWE VIFFIAEHNH  240
ALVDKPSLTK YLRSHQGIPP EEKLFLTNLH NCNLTTGVCH VYYIYMPTFK E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199204KKKKRK
2199205KKKKRKK
3199206KKKKRKKR
4199207KKKKRKKRK
5199225KKKKRKKRKRDTIVHTGCRARMVVKLK
6200206KKKKRKK
7200208KKKKRKKRK
8201207KKKKRKK
9201205KKRKK
10202208KKKKRKK
11203208RKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-11FAR1 family protein