PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG029010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 832aa    MW: 91073 Da    PI: 5.7195
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG029010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.88.8e-193290357
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      k  ++t+eq+e+Le++++++++p+ ++r++L +++    +++ rq+kvWFqNrR ++k+
  TRIDC1BG029010.1 32 KYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECpilsNIEPRQIKVWFQNRRCRDKQ 90
                      5678****************************************************996 PP

2START160.21.6e-501703772204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv ++ +++g+++  +++ s++++g a+ra+g+v  ++++ ve+l d++  W +++++ e+   +  g  g+++
  TRIDC1BG029010.1 170 IAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRP-SWFRDCRSLEVFTMLPAGngGTIE 261
                       6899******************************************************9999999999.****************9999**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++++a+++lvp Rdf+++Ry+ ++++g++v++++S++     p+    +++vRae+lpSg+l++p+++g+s v++v+h dl++++++++l
  TRIDC1BG029010.1 262 LVYMQMYAPTTLVPaRDFWTLRYTTTMEDGSLVVCERSLSGSGGGPStasAQQFVRAEMLPSGYLVRPCDGGGSIVHIVDHLDLEAWSVPEVL 354
                       ****************************************9999998888899**************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s+++ ++k+++a+l++ +
  TRIDC1BG029010.1 355 RPLYESSRVVAQKMTTAALRHIR 377
                       *******************9865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 832 aa     Download sequence    
MAAAVAAMRC GSGSGSDGGG GGYDKGGMDS GKYVRYTPEQ VEALERVYAE CPKPTSTRRQ  60
QLLRECPILS NIEPRQIKVW FQNRRCRDKQ RKESSRLQAV NRKLSAMNKL LMEENERLQK  120
QVSQLVHENA YMKQQLQNPS LANDTSCESN VTTPPNPLRD ASNPAGLLAI AEETLTEFLS  180
KATGTAVDWV PMPGMKPGPD SFGIVAVSHG CRGVAARACG LVNLEPTKIV EILKDRPSWF  240
RDCRSLEVFT MLPAGNGGTI ELVYMQMYAP TTLVPARDFW TLRYTTTMED GSLVVCERSL  300
SGSGGGPSTA SAQQFVRAEM LPSGYLVRPC DGGGSIVHIV DHLDLEAWSV PEVLRPLYES  360
SRVVAQKMTT AALRHIRQIA QETSGEVVYA LGRQPAVLRT FSQRLSRGFN DAISGFNDDG  420
WSVMAGDGIE DVIIACNSKK IRSNNTAPNA FIVPGGVICA KASMLLQSVP PAVLVRFLRE  480
HRSEWADYNF DAYSASALKS SSCSLPGLRP MRFSGSQIIM PLAHTVENEE ILEVVRLEGQ  540
ALDEGLLSRD IHLLQFCTGI DEKSMGSCFQ LVFAPIDELF PDDAPLISSG FRVIPLDMKT  600
DGAPAGRTLD LASSLEAGST TLQASGGADD CNLRSVLTIA FQFPYEMHLQ DSVATMARQY  660
VRSIVSAVQR VSMAISPSRS GLNAEQKIIS GFPEAATLAR WICQSYRFHL GVELFRQADE  720
AGESLLRMLW DHEDAILCCS FKEKPVFTFA NEMGINMLET SFVALQDLSL DKIFDEAGRK  780
ALYSEIPKLM EQGFVYLPGG VCLSGMGRHV SFESAVAWKV VGEDNNVHCL AF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein