PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG029010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 832aa MW: 91073 Da PI: 5.7195 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.8 | 8.8e-19 | 32 | 90 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le++++++++p+ ++r++L +++ +++ rq+kvWFqNrR ++k+ TRIDC1BG029010.1 32 KYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECpilsNIEPRQIKVWFQNRRCRDKQ 90 5678****************************************************996 PP | |||||||
2 | START | 160.2 | 1.6e-50 | 170 | 377 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 +aee+++e+++ka+ ++ Wv ++ +++g+++ +++ s++++g a+ra+g+v ++++ ve+l d++ W +++++ e+ + g g+++ TRIDC1BG029010.1 170 IAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRP-SWFRDCRSLEVFTMLPAGngGTIE 261 6899******************************************************9999999999.****************9999**** PP EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS START 93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181 l +++++a+++lvp Rdf+++Ry+ ++++g++v++++S++ p+ +++vRae+lpSg+l++p+++g+s v++v+h dl++++++++l TRIDC1BG029010.1 262 LVYMQMYAPTTLVPaRDFWTLRYTTTMEDGSLVVCERSLSGSGGGPStasAQQFVRAEMLPSGYLVRPCDGGGSIVHIVDHLDLEAWSVPEVL 354 ****************************************9999998888899**************************************** PP HHHHHHHHHHHHHHHHHHTXXXX CS START 182 rslvksglaegaktwvatlqrqc 204 r+l++s+++ ++k+++a+l++ + TRIDC1BG029010.1 355 RPLYESSRVVAQKMTTAALRHIR 377 *******************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 832 aa Download sequence |
MAAAVAAMRC GSGSGSDGGG GGYDKGGMDS GKYVRYTPEQ VEALERVYAE CPKPTSTRRQ 60 QLLRECPILS NIEPRQIKVW FQNRRCRDKQ RKESSRLQAV NRKLSAMNKL LMEENERLQK 120 QVSQLVHENA YMKQQLQNPS LANDTSCESN VTTPPNPLRD ASNPAGLLAI AEETLTEFLS 180 KATGTAVDWV PMPGMKPGPD SFGIVAVSHG CRGVAARACG LVNLEPTKIV EILKDRPSWF 240 RDCRSLEVFT MLPAGNGGTI ELVYMQMYAP TTLVPARDFW TLRYTTTMED GSLVVCERSL 300 SGSGGGPSTA SAQQFVRAEM LPSGYLVRPC DGGGSIVHIV DHLDLEAWSV PEVLRPLYES 360 SRVVAQKMTT AALRHIRQIA QETSGEVVYA LGRQPAVLRT FSQRLSRGFN DAISGFNDDG 420 WSVMAGDGIE DVIIACNSKK IRSNNTAPNA FIVPGGVICA KASMLLQSVP PAVLVRFLRE 480 HRSEWADYNF DAYSASALKS SSCSLPGLRP MRFSGSQIIM PLAHTVENEE ILEVVRLEGQ 540 ALDEGLLSRD IHLLQFCTGI DEKSMGSCFQ LVFAPIDELF PDDAPLISSG FRVIPLDMKT 600 DGAPAGRTLD LASSLEAGST TLQASGGADD CNLRSVLTIA FQFPYEMHLQ DSVATMARQY 660 VRSIVSAVQR VSMAISPSRS GLNAEQKIIS GFPEAATLAR WICQSYRFHL GVELFRQADE 720 AGESLLRMLW DHEDAILCCS FKEKPVFTFA NEMGINMLET SFVALQDLSL DKIFDEAGRK 780 ALYSEIPKLM EQGFVYLPGG VCLSGMGRHV SFESAVAWKV VGEDNNVHCL AF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG029010.1 |