PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG029000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 691aa    MW: 74745.3 Da    PI: 7.7002
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG029000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.37.1e-24124225199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f k+lt+sd+++ g +++p+ +ae++         ++ +  t+  +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF   +
  TRIDC1BG029000.1 124 FAKTLTQSDANNGGGFSVPRYCAETIfpkldyrADPPVQ--TVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--R 212
                       89****************************996555555..8999*********************************************..5 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       ++ +el+v+++r+
  TRIDC1BG029000.1 213 TEHGELCVGIRRA 225
                       5999*******97 PP
2Auxin_resp118.65e-39281364183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                       aa+ a+++++FevvY+Prast+eFvvk++ +++a+++++++GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+
  TRIDC1BG029000.1 281 AATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWfMGTISSVQVADPLRWPNSPWRLLQ 364
                       68899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MKEVGEERCL DPQLWHACAG GMVQMPPARS RVYYFPQGHA EHANGGGGSA AAELAAAVGP  60
RPLPALVLCC VAGVRFLADP ETDEVFAKIR LVPVGPGEAG FREPEGLGPL GGDPAEARDK  120
LASFAKTLTQ SDANNGGGFS VPRYCAETIF PKLDYRADPP VQTVLAKDVH GEVWKFRHIY  180
RGTPRRHLLT TGWSTFVNQK KLVAGDSIVF LRTEHGELCV GIRRAKRVTC GGMECISGWN  240
APGYGGFSAF LKDEENKMMN GGPAGYVKGR GKVKIDHVVE AATLAANSQP FEVVYYPRAS  300
TPEFVVKAAA MQAAMRIHWC PGMRFKMAFE TEDSSRISWF MGTISSVQVA DPLRWPNSPW  360
RLLQVTWDEP DLLQNVKCVS PWLVELVSSI PPIHLGPFSP PRKKLRVPQH PDFPLDGHLF  420
NPIFHGNPLG PSNSPLCCYS DNNSPAGIQG ARHAQFGLPL TDHQLNKLHL GLFHSGGFNR  480
LDALTPSSRI PKGFVLSSAP AHDSVSCLLT IGTPQSTEKS VDRKTPHIML FGKAILTEQQ  540
MTSSGSRETL SSGATGNSSP ISTGLKAGNT SDGSGSSICI GFSSQGHEAS DLGLEAGHCK  600
VFMESEDVGR TIDLSVFGSY DELYGRLADM FGIEKEEIIS HLRYRDTAGA VMHTGGLPFS  660
DFMKVARRLT IISGEKGGLA KPLIECMVQR V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein