PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG028530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 187aa MW: 19125.8 Da PI: 8.0997 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34 | 6.9e-11 | 44 | 80 | 9 | 47 |
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ + TRIDC1BG028530.1 44 EDLIIRLHQALGNR-WSVIAAQLP-GRTDNEIKNVWHAH 80 6799**********.*********.***********876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MATPTGAPSP STQGFCGAGR AVACGGSTTS ARTSSGATSP ADKEDLIIRL HQALGNRWSV 60 IAAQLPGRTD NEIKNVWHAH LKKRLEDGLK PAADQDAGGS GRKKSRKQSK ARSATVDAGE 120 QYTSPPGQSS SGLTCSTVTE SAPAVSSSPS DNATITSASH GHQLVKEDTS SSEAVTDNSF 180 LSSTDVT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 108 | GRKKSRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.2 | 1e-23 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG028530.1 |