PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG025500.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 202aa    MW: 22792.8 Da    PI: 8.4017
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG025500.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.32.3e-2722108371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e  g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC1BG025500.7  22 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 108
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
SLRLSDKKKK KGTRVVGPDK GNRGLRQFSM KVCEKVEGKG RTTYNEVADE LVAEFADPNS  60
NIGSPDPDNP NTQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLSDIDKL  120
KTEVIGLKGR IDKKSAYLQE LQDQYVGLQN LVERNEQLYG SGDAPSGGVA LPFILVQTRP  180
HATVEVEISE DMQLVHFDFN RV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1315RLSDKKKKKGTRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-113E2F/DP family protein