PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG025500.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 277aa MW: 30722.8 Da PI: 8.6274 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85.3 | 4.5e-27 | 22 | 108 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC1BG025500.5 22 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 108 689*******...*****999************************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
RSPPLGKKKK KGTRVVGPDK GNRGLRQFSM KVCEKVEGKG RTTYNEVADE LVAEFADPNS 60 NIGSPDPDNP NTQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLSDIDKL 120 KTEVIGLKGR IDKKSAYLQE LQDQYVGLQN LVERNEQLYG SGDAPSGGVA LPFILVQTRP 180 HATVEVEISE DMQLVHFDFN STPFELHDDS FVLKAMGFSG KEETDGTVAL VANAVECSSA 240 SNVYGHRSPQ PARPNGIRLR TSPPIPGILK GRVKHEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-121 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG025500.5 |