PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG025500.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 348aa MW: 37139.6 Da PI: 8.2181

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG025500.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.7	7e-27	93	179	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC1BG025500.2 93 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 179 689*****...*999********************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MVSSARSSGG MAHSASNSAG SAGSPSGGIG PGKGVAAAAA TTSASASTPA SGSTVARRLN 60 DLEIQGDDAP SSQPAAIKKK KKGTRVVGPD KGNRGLRQFS MKVCEKVEGK GRTTYNEVAD 120 ELVAEFADPN SNIGSPDPDN PNTQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL 180 PRTSLSDIDK LKTEVIGLKG RIDKKSAYLQ ELQDQYVGLQ NLVERNEQLY GSGDAPSGGV 240 ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD SFVLKAMGFS GKEETDGTVA 300 LVANAVECSS ASNVYGHRSP QPARPNGIRL RTSPPIPGIL KGRVKHEH

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MVSSARSSGG MAHSASNSAG SAGSPSGGIG PGKGVAAAAA TTSASASTPA SGSTVARRLN  60
DLEIQGDDAP SSQPAAIKKK KKGTRVVGPD KGNRGLRQFS MKVCEKVEGK GRTTYNEVAD  120
ELVAEFADPN SNIGSPDPDN PNTQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL  180
PRTSLSDIDK LKTEVIGLKG RIDKKSAYLQ ELQDQYVGLQ NLVERNEQLY GSGDAPSGGV  240
ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD SFVLKAMGFS GKEETDGTVA  300
LVANAVECSS ASNVYGHRSP QPARPNGIRL RTSPPIPGIL KGRVKHEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-132	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG025500.2