PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG022960.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 399aa MW: 44625.9 Da PI: 5.1728 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 69 | 111 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ +l++a++ +G++ W+ ++ ++ gRt++ +k++w+ TRIDC1BG022960.9 69 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 111 689*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
LNLRGEGKGR EDYFAFQSNK ERETFPFVLG RLGIWWRRRQ EAQAARVNRC WGRRTRRVRS 60 TGEKTIINKD AWTQEEEIRL IQAHHIYGNK WAELSKFLPG RTDNAIKNHW HSSVKKKYES 120 YRAEGLLAQF QGLPAVVCPT GSLNVDSSSA MMQQNSDGSG LNVNQEVQDS SEFSQSALAN 180 ISSSQVEQVD EPVGCHGQIH SNDGAHDSYS SCQEACHTKA NDAASTSPET RHQLSISEND 240 PDIHWQQDLS VADFDLQSEL WQDISYQSLL TAPDSISADS FFSPNYQHSA CSSEVANNFE 300 ERLYPLRTYS SSRTGTVHHQ SSATSVPPSF LCSGRASQIV SSELPIVPES KEQQMTSVEE 360 SLPIVPESKE QQLTGVEESQ PLESTTMGRE ASPNQVNPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 1e-31 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG022960.9 |