PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022960.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 345aa    MW: 38062.5 Da    PI: 4.5708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022960.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171557145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      +++WT+eE+ +l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  TRIDC1BG022960.8 15 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 57
                      689*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MRSFICGHVK TIINKDAWTQ EEEIRLIQAH HIYGNKWAEL SKFLPGRTDN AIKNHWHSSV  60
KKKYESYRAE GLLAQFQGLP AVVCPTGSLN VDSSSAMMQQ NSDGSGLNVN QEVQDSSEFS  120
QSALANISSS QVEQVDEPVG CHGQIHSNDG AHDSYSSCQE ACHTKANDAA STSPETRHQL  180
SISENDPDIH WQQDLSVADF DLQSELWQDI SYQSLLTAPD SISADSFFSP NYQHSACSSE  240
VANNFEERLY PLRTYSSSRT GTVHHQSSAT SVPPSFLCSG RASQIVSSEL PIVPESKEQQ  300
MTSVEESLPI VPESKEQQLT GVEESQPLES TTMGREASPN QVNPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.13e-33MYB family protein