PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG022960.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 340aa MW: 37517 Da PI: 4.5186 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 10 | 52 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ +l++a++ +G++ W+ ++ ++ gRt++ +k++w+ TRIDC1BG022960.6 10 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 52 689*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 340 aa Download sequence |
MILKKTIINK DAWTQEEEIR LIQAHHIYGN KWAELSKFLP GRTDNAIKNH WHSSVKKKYE 60 SYRAEGLLAQ FQGLPAVVCP TGSLNVDSSS AMMQQNSDGS GLNVNQEVQD SSEFSQSALA 120 NISSSQVEQV DEPVGCHGQI HSNDGAHDSY SSCQEACHTK ANDAASTSPE TRHQLSISEN 180 DPDIHWQQDL SVADFDLQSE LWQDISYQSL LTAPDSISAD SFFSPNYQHS ACSSEVANNF 240 EERLYPLRTY SSSRTGTVHH QSSATSVPPS FLCSGRASQI VSSELPIVPE SKEQQMTSVE 300 ESLPIVPESK EQQLTGVEES QPLESTTMGR EASPNQVNPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11510.1 | 2e-32 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG022960.6 |