PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022960.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 311aa    MW: 34593.8 Da    PI: 4.6088
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022960.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-171052145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      +++WT+eE+ +l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  TRIDC1BG022960.4 10 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 52
                      689*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MILKKTIINK DAWTQEEEIR LIQAHHIYGN KWAELSKFLP GRTDNAIKNH WHSSVKKKYE  60
SYRAEGLLAQ FQGLPAVEVQ DSSEFSQSAL ANISSSQVEQ VDEPVGCHGQ IHSNDGAHDS  120
YSSCQEACHT KANDAASTSP ETRHQLSISE NDPDIHWQQD LSVADFDLQS ELWQDISYQS  180
LLTAPDSISA DSFFSPNYQH SACSSEVANN FEERLYPLRT YSSSRTGTVH HQSSATSVPP  240
SFLCSGRASQ IVSSELPIVP ESKEQQMTSV EESLPIVPES KEQQLTGVEE SQPLESTTMG  300
REASPNQVNP W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.12e-31MYB family protein