PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022960.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 340aa    MW: 37517 Da    PI: 4.5186
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022960.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171052145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       +++WT+eE+ +l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  TRIDC1BG022960.10 10 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 52
                       689*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MILKKTIINK DAWTQEEEIR LIQAHHIYGN KWAELSKFLP GRTDNAIKNH WHSSVKKKYE  60
SYRAEGLLAQ FQGLPAVVCP TGSLNVDSSS AMMQQNSDGS GLNVNQEVQD SSEFSQSALA  120
NISSSQVEQV DEPVGCHGQI HSNDGAHDSY SSCQEACHTK ANDAASTSPE TRHQLSISEN  180
DPDIHWQQDL SVADFDLQSE LWQDISYQSL LTAPDSISAD SFFSPNYQHS ACSSEVANNF  240
EERLYPLRTY SSSRTGTVHH QSSATSVPPS FLCSGRASQI VSSELPIVPE SKEQQMTSVE  300
ESLPIVPESK EQQLTGVEES QPLESTTMGR EASPNQVNPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.12e-32MYB family protein