PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 338aa    MW: 37348.6 Da    PI: 4.5708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.91e-17850145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      r++WT+eE+ +l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  TRIDC1BG022960.1  8 RDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 50
                      789*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
APRQIHRRDA WTQEEEIRLI QAHHIYGNKW AELSKFLPGR TDNAIKNHWH SSVKKKYESY  60
RAEGLLAQFQ GLPAVVCPTG SLNVDSSSAM MQQNSDGSGL NVNQEVQDSS EFSQSALANI  120
SSSQVEQVDE PVGCHGQIHS NDGAHDSYSS CQEACHTKAN DAASTSPETR HQLSISENDP  180
DIHWQQDLSV ADFDLQSELW QDISYQSLLT APDSISADSF FSPNYQHSAC SSEVANNFEE  240
RLYPLRTYSS SRTGTVHHQS SATSVPPSFL CSGRASQIVS SELPIVPESK EQQMTSVEES  300
LPIVPESKEQ QLTGVEESQP LESTTMGREA SPNQVNPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.19e-31MYB family protein