PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 276aa    MW: 31237.2 Da    PI: 9.7586
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.36.2e-3151101151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs +g+lyeys+
  TRIDC1BG022160.4  51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSGRGRLYEYSN 101
                       79***********************************************95 PP
2K-box103.72.4e-341192163100
             K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                       +ss   ++e +a+++qqe+akLk++i +Lq+++R l+G+ + ++s+++L+qLe +L+k+l kiR++Knell+++ie++q++e elq++n  Lr
  TRIDC1BG022160.4 119 TSSAGTVAEINAQHYQQESAKLKQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLCAEIEYMQRREMELQNNNFFLR 211
                       4455559999*********************************************************************************** PP

             K-box  96 kklee 100
                       +k++e
  TRIDC1BG022160.4 212 EKVAE 216
                       **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
RPRNTNMQIL NEQLAAPSTG LMVKESASPG SGSGSPGGAA EKMGRGRIEI KRIENTTNRQ  60
VTFCKRRNGL LKKAYELSVL CDAEVALIVF SGRGRLYEYS NNSSVKATIE RYKKATSDTS  120
SAGTVAEINA QHYQQESAKL KQQITTLQNS NRTLIGDTMA TMSHRDLKQL EGRLDKGLGK  180
IRARKNELLC AEIEYMQRRE MELQNNNFFL REKVAETERG QQQTLNMMGA ASTSDEYEQN  240
MIHCDPRTFL QFNFMQQQPQ YYSQQEDRKS LNSVGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.13e-94MIKC_MADS family protein