PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG018900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 23062.5 Da PI: 9.2353 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34 | 5.1e-11 | 29 | 74 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+e ErrRR+riN+ +++Lr+++P a ++Ka+ L +v+ +k+L TRIDC1BG018900.1 29 VHSESERRRRERINTHLATLRRMIPDA-----NQMDKATLLACVVNQVKEL 74 59************************8.....4799999998888877776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MATCQAPTSA PELSSSSGRS ATEVRSLKVH SESERRRRER INTHLATLRR MIPDANQMDK 60 ATLLACVVNQ VKELKRKATE TTRLQATVPI PPEANEITVQ CYTAASDNRT TCIHATVSCD 120 DRPGLFVGLT GAFRGLGLRV LRTETASLGG RASHLFVLCK EGRDVGAGMR ALEGAVRQAM 180 AEVAFPEMVC GGSSWSKRER ILEGRCPVMY SV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 39 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 5e-25 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG018900.1 |