PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG016240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 446aa MW: 49554.4 Da PI: 6.0052

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG016240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	273	318	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1BG016240.2 273 SHVMQERKRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQL 318 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MGLVQYAMAI FMDQQETHMI PSICHSNQTS HIDQQSLQTH TGQTKPEPNK FDPEYEDDEM 60 EYDEDEIDAG CASGSETNTG WDYCRHGPPN ITSNDDHATH NAGRSSELMQ VEMSERVRDG 120 CSSNLGDEIQ MLMVCQNGTS DHSNLHVQDE PWHFLYEELC SGYPQSSAAG EDQAMAENAH 180 YAHTVSLILH RNNARRQADG LNTRSYLAVS HRSSFSRWDA GIHGRTVAEG TTRQKMLKSV 240 LLFFNAACNK PPGDLILRCD EAGARREVDF GASHVMQERK RREKLNERFI ILRSLVPFVT 300 KMDKASILGD TIEYVKQLTK RIQDLESSTV RGAAMPKEKR ALLTGKEGPS SSSGSSSSAP 360 VATDVQVSII ESDALLELRC PDRRGLLVTI MQALQEQLRL EVTSVQASSD HGVLLAEMRA 420 KVREVHGRSS SISQVKRAIH LIISSG

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MGLVQYAMAI FMDQQETHMI PSICHSNQTS HIDQQSLQTH TGQTKPEPNK FDPEYEDDEM  60
EYDEDEIDAG CASGSETNTG WDYCRHGPPN ITSNDDHATH NAGRSSELMQ VEMSERVRDG  120
CSSNLGDEIQ MLMVCQNGTS DHSNLHVQDE PWHFLYEELC SGYPQSSAAG EDQAMAENAH  180
YAHTVSLILH RNNARRQADG LNTRSYLAVS HRSSFSRWDA GIHGRTVAEG TTRQKMLKSV  240
LLFFNAACNK PPGDLILRCD EAGARREVDF GASHVMQERK RREKLNERFI ILRSLVPFVT  300
KMDKASILGD TIEYVKQLTK RIQDLESSTV RGAAMPKEKR ALLTGKEGPS SSSGSSSSAP  360
VATDVQVSII ESDALLELRC PDRRGLLVTI MQALQEQLRL EVTSVQASSD HGVLLAEMRA  420
KVREVHGRSS SISQVKRAIH LIISSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	283	ERKRRE
2	279	284	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	9e-43	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG016240.2