PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG016240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 637aa MW: 70116.5 Da PI: 6.027

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG016240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.1	3.6e-14	464	509	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1BG016240.1 464 SHVMQERKRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQL 509 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MASSGEVHRS LQAVAQGLRW TYAILWQLCP DQGALVWTEG HYNGAIKTRK TVQPAVAQAQ 60 APAAEAADQA RSRQLRELFD SLAREAAAGG GTGFRDVHGC AQEARRPSAA LAPEDLTETE 120 WFYLMSASYS FPPGVGLPGR AFARGGHVWL SRANEVDSKA FSRAILARTV VCIPIVDGVL 180 EIGTTEKVEE EMGLVQYAMA IFMDQQETHM IPSICHSNQT SHIDQQSLQT HTGQTKPEPN 240 KFDPEYEDDE MEYDEDEIDA GCASGSETNT GWDYCRHGPP NITSNDDHAT HNAGRSSELM 300 QVEMSERVRD GCSSNLGDEI QMLMVCQNGT SDHSNLHVQD EPWHFLYEEL CSGYPQSSAA 360 GEDQAMAENA HYAHTVSLIL HRNNARRQAD GLNTRSYLAV SHRSSFSRWD AGIHGRTVAE 420 GTTRQKMLKS VLLFFNAACN KPPGDLILRC DEAGARREVD FGASHVMQER KRREKLNERF 480 IILRSLVPFV TKMDKASILG DTIEYVKQLT KRIQDLESST VRGAAMPKEK RALLTGKEGP 540 SSSSGSSSSA PVATDVQVSI IESDALLELR CPDRRGLLVT IMQALQEQLR LEVTSVQASS 600 DHGVLLAEMR AKVREVHGRS SSISQVKRAI HLIISSG

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MASSGEVHRS LQAVAQGLRW TYAILWQLCP DQGALVWTEG HYNGAIKTRK TVQPAVAQAQ  60
APAAEAADQA RSRQLRELFD SLAREAAAGG GTGFRDVHGC AQEARRPSAA LAPEDLTETE  120
WFYLMSASYS FPPGVGLPGR AFARGGHVWL SRANEVDSKA FSRAILARTV VCIPIVDGVL  180
EIGTTEKVEE EMGLVQYAMA IFMDQQETHM IPSICHSNQT SHIDQQSLQT HTGQTKPEPN  240
KFDPEYEDDE MEYDEDEIDA GCASGSETNT GWDYCRHGPP NITSNDDHAT HNAGRSSELM  300
QVEMSERVRD GCSSNLGDEI QMLMVCQNGT SDHSNLHVQD EPWHFLYEEL CSGYPQSSAA  360
GEDQAMAENA HYAHTVSLIL HRNNARRQAD GLNTRSYLAV SHRSSFSRWD AGIHGRTVAE  420
GTTRQKMLKS VLLFFNAACN KPPGDLILRC DEAGARREVD FGASHVMQER KRREKLNERF  480
IILRSLVPFV TKMDKASILG DTIEYVKQLT KRIQDLESST VRGAAMPKEK RALLTGKEGP  540
SSSSGSSSSA PVATDVQVSI IESDALLELR CPDRRGLLVT IMQALQEQLR LEVTSVQASS  600
DHGVLLAEMR AKVREVHGRS SSISQVKRAI HLIISSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	474	ERKRRE
2	470	475	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-59	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG016240.1