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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG015350.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 168aa MW: 18122.4 Da PI: 7.4553 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 90.1 | 2.1e-28 | 61 | 119 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 ++v+Y+eC +NhA + Ggh+vDGCgE+mp + + ++a++ kCaACgCHR+FHR+ ++e TRIDC1BG015350.2 61 QEVKYNECGRNHALASGGHVVDGCGEWMPLGDLNpADASSYKCAACGCHRSFHRKVMTE 119 579***************************999999*******************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
KSSSLSHTSG PLDVTQPTAG SRLCVHLRKG GCEFSDTAEA MDVKYPSGSV KRQAAVAPTV 60 QEVKYNECGR NHALASGGHV VDGCGEWMPL GDLNPADASS YKCAACGCHR SFHRKVMTER 120 SPPLAPMVET VLHGLPQRRK EETPEDRLPG VDSDTNHCNL HPCTIQCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 5e-18 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG015350.2 |