PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG014540.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 390aa MW: 42137.9 Da PI: 7.0145

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG014540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.1e-10	332	365	4	32
HHHHHHHHHHHHHHHHHHHHHCTSCCC....... CS HLH 4 ahnerErrRRdriNsafeeLrellPkas.....k 32 hn+ ErrRRdriN+++ L+el+P++ TRIDC1BG014540.1 332 VHNMSERRRRDRINEKMRALQELIPNCNkvhdtP 365 5*************************85466554 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MSEPGNELEE LLWDNGPALR RAASPFPPFS CSAAGTMKAQ ELAKHPASAT AMAQGHDDDA 60 VPWLQHYPII GVDDDGSGGD TAPLPQDYFS TLFPGFSELP AAVASRDAGA PSTSHAAVVV 120 PPLPEPPAPP KQQQQAPRST GEGVMNFSFF SRPLQRSLPQ ASTRTSAAGS KSVESTLLQT 180 NRLRSTPLFS EQRTAWLQPP KESPAAVSAS RPPAPPVPVR HAAEPAAALP QRLQPEARAA 240 ALPPRLQPEV RAAALPQRLQ SEARASEMPP PPATATTSSV CSDNGERSQL KRSSHQTLEW 300 SVSQDDEDLD DEAGGLRRSA ARSTKRGRTA EVHNMSERRR RDRINEKMRA LQELIPNCNK 360 VHDTPNPRKK TRKIFDNEHS VTSNVCGDED

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MSEPGNELEE LLWDNGPALR RAASPFPPFS CSAAGTMKAQ ELAKHPASAT AMAQGHDDDA  60
VPWLQHYPII GVDDDGSGGD TAPLPQDYFS TLFPGFSELP AAVASRDAGA PSTSHAAVVV  120
PPLPEPPAPP KQQQQAPRST GEGVMNFSFF SRPLQRSLPQ ASTRTSAAGS KSVESTLLQT  180
NRLRSTPLFS EQRTAWLQPP KESPAAVSAS RPPAPPVPVR HAAEPAAALP QRLQPEARAA  240
ALPPRLQPEV RAAALPQRLQ SEARASEMPP PPATATTSSV CSDNGERSQL KRSSHQTLEW  300
SVSQDDEDLD DEAGGLRRSA ARSTKRGRTA EVHNMSERRR RDRINEKMRA LQELIPNCNK  360
VHDTPNPRKK TRKIFDNEHS VTSNVCGDED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	342	ERRRRD
2	338	373	RRRRDRINEKMRALQELIPNCNKVHDTPNPRKKTRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-16	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG014540.1