PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG013390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 35902.2 Da PI: 6.3473 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.8 | 3.4e-20 | 47 | 94 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd llvd++ ++G g+W++ ar+ g++Rt+k+c++rw++yl TRIDC1BG013390.1 47 RGPWTAEEDMLLVDYISKHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 94 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.8e-17 | 100 | 143 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC1BG013390.1 100 RGNITPEEQLLILDLHSRWGNR-WSKIAQRLP-GRTDNEVKNYWRT 143 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MDMDKEYYKA CMGMEALPMS PAGFSAVTTE VTMVVATASE DEGDLKRGPW TAEEDMLLVD 60 YISKHGEGRW NSLARCAGLR RTGKSCRLRW LNYLRPDVRR GNITPEEQLL ILDLHSRWGN 120 RWSKIAQRLP GRTDNEVKNY WRTRVQKHAK QLHCDVNSDR FRDVVRQVWM PRLLERVQAE 180 SSSAAAAAAA GVGVPALTRA MSSPAGASQY HYHCVDHASS GEPSRKVAVT MSPDTSSTLR 240 SSLSPAETSH GAHFPAWGAA TATANVDGSM MQCAGREGGA IGGDQYVIHG DSLSGSWSEL 300 LAATDIPDFE FGNFDDNLWS LEDIYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 2e-77 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG013390.1 |