PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 352aa    MW: 38526.8 Da    PI: 5.3273
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.11.6e-18219309199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  
  TRIDC1BG013330.15 219 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF-- 302
                        88999999******************6..34789****************555555....9**********************9876666.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v ++r+
  TRIDC1BG013330.15 303 KVYILRE 309
                        8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
APEVSASDQP AMAIDEPTKS KRGTPAGDPH SAKSKMGQKM VHRRRPLLDE GSSSRNEDAG  60
DDDDFEPMAM GGTPAGDSPH SARTKMGQKM SLAHRRLSLL DDGSSISRHI AAAAAAADDD  120
GGGSEQMGEE FAVDVAQKNT TVDDSDDPDG SEDDFVPLIF QRKKPGRSAG PVYAKRKIEK  180
KPRLVGSNNI SKISDDDGQK KYARALEVEK KLPAEGPSFV KLMQISHVVR VFWLGVPVSF  240
CREHLPNHDV TIVLEDEDGH RFDTNYLARK QGLSGGWNRF ATRHHLKVGD AVVFQLVEPT  300
RFKVYILRET KFTTTDGALS LLSLDTSMEN NMPAEQGEDT SDEDVKSKED PE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-33B3 family protein