PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 544aa    MW: 60535.1 Da    PI: 5.1307
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.2e-18195285199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  
  TRIDC1BG013330.12 195 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF-- 278
                        88999999******************6..34789****************555555....9**********************9876666.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v ++r+
  TRIDC1BG013330.12 279 KVYILRE 285
                        8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MGQKMVHRRR PLLDEGSSSR NEDAGDDDDF EPMAMGGTPA GDSPHSARTK MGQKMSLAHR  60
RLSLLDDGSS ISRHIAAAAA AADDDGGGSE QMGEEFAVDV AQKNTTVDDS DDPDGSEDDF  120
VPLIFQRKKP GRSAGPVYAK RKIEKKPRLV GSNNISKISD DDGQKKYASV LGFYVTAFDR  180
ALEVEKKLPA EGPSFVKLMQ ISHVVRVFWL GVPVSFCREH LPNHDVTIVL EDEDGHRFDT  240
NYLARKQGLS GGWNRFATRH HLKVGDAVVF QLVEPTRFKV YILRETKFTT TDGALSLLSL  300
DTSMENNMPE QGEDTSDEDV KSKEDPEATK VITNKASDDD SNDLFSEEAA NGGIRSPDPD  360
PDFDAVKTFR TFKMVMDSSV IDRKLVPDRL LWTYYKLCGD RKAFLHRRLP KHINLTLAAG  420
VIAETASIAE GIRSYPTSCS SSEELAAWKK TLESFELLGM DVGFIRKRLD ELLFLLDARS  480
SDDHPPEGYE EVKLERARAA EKMRALESKM ASLKDALKDM DMEMEEIAEK RRGHAMLQLA  540
AAPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein