PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 546aa    MW: 60785.4 Da    PI: 5.1307
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.2e-18197287199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  
  TRIDC1BG013330.11 197 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF-- 280
                        88999999******************6..34789****************555555....9**********************9876666.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v ++r+
  TRIDC1BG013330.11 281 KVYILRE 287
                        8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MGQKMVHRRR PLLDEGSSSR NEDAGDDDDF EPMAMGGTPA GDSPHSARTK MGQKMSLAHR  60
RLSLLDDGSS ISRHIAAAAA AADDDGGGSE QMGEEFAVDV AQKNTTVDDS DDPDGSEDDF  120
VPLIFQRKKP GRSAGPVYAK RKIEKKPRLV GSNNISKISD DDGQKKYASY SVLGFYVTAF  180
DRALEVEKKL PAEGPSFVKL MQISHVVRVF WLGVPVSFCR EHLPNHDVTI VLEDEDGHRF  240
DTNYLARKQG LSGGWNRFAT RHHLKVGDAV VFQLVEPTRF KVYILRETKF TTTDGALSLL  300
SLDTSMENNM PEQGEDTSDE DVKSKEDPEA TKVITNKASD DDSNDLFSEE AANGGIRSPD  360
PDPDFDAVKT FRTFKMVMDS SVIDRKLVPD RLLWTYYKLC GDRKAFLHRR LPKHINLTLA  420
AGVIAETASI AEGIRSYPTS CSSSEELAAW KKTLESFELL GMDVGFIRKR LDELLFLLDA  480
RSSDDHPPEG YEEVKLERAR AAEKMRALES KMASLKDALK DMDMEMEEIA EKRRGHAMLQ  540
LAAAPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein