PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG012960.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 156aa MW: 17718.1 Da PI: 7.5737 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31 | 4.2e-10 | 87 | 120 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1BG012960.5 87 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 120 59*****************************985 PP | |||||||
2 | ELK | 34.4 | 4.8e-12 | 40 | 61 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1BG012960.5 40 ELKEMLLKKYSGCLSRLRSEFL 61 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MVSIMQDEMV GSSEDEPCSG DVDGSDAGMQ EHSSRLADHE LKEMLLKKYS GCLSRLRSEF 60 LKKRKKGKLP KDARLALMDW WNTHYRWPYP TEEDKVRLAA MTGLDPKQIN NWFINQRKRH 120 WKPSEDMRFA LMEGVTGGGG SSSGTTLYFD TGTIGP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 65 | LRSEFLKKRK |
2 | 62 | 66 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 3e-39 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG012960.5 |