PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 275aa MW: 30313.2 Da PI: 5.7042

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	206	239	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1BG012960.3 206 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 239 59*****************************885 PP
2	ELK	33.3	1e-11	159	180	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1BG012960.3 159 ELKEMLLKKYSGCLSRLRSEFL 180 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
SSPPPPPPPA DLTELMKAQI AGHPRYPSLL SAYIECRKVG APPEVAALLE EIGQPERRGG 60 GATATGEIGL DPELDEFMEA YCRLLSRYKE ELSRPLDEAA SFLTTIRSQL TNLCGGGATA 120 TSPHSDEMVG SSEDEPCSGD VDGSDAGMQE HSSRLADHEL KEMLLKKYSG CLSRLRSEFL 180 KKRKKGKLPK DARLALMDWW NTHYRWPYPT EEDKVRLAAM TGLDPKQINN WFINQRKRHW 240 KPSEDMRFAL MEGVTGGGGS SSGTTLYFDT GTIGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	184	LRSEFLKKRK
2	181	185	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-81	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012960.3