PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG012960.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 306aa MW: 33074.1 Da PI: 5.6788 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.8 | 2.1e-09 | 237 | 270 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1BG012960.2 237 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 270 59*****************************885 PP | |||||||
2 | ELK | 33.1 | 1.2e-11 | 190 | 211 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1BG012960.2 190 ELKEMLLKKYSGCLSRLRSEFL 211 9********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence |
SIHPGISRGG EGGAACSEAS GVAGGASSPP PPPPPADLTE LMKAQIAGHP RYPSLLSAYI 60 ECRKVGAPPE VAALLEEIGQ PERRGGGATA TGEIGLDPEL DEFMVAYCRL LSRYKEELSR 120 PLDEAASFLT TIRSQLTNLC GGGATATSPH SDSTDSYEMV GSSEDEPCSG DVDGSDAGMQ 180 EHSSRLADHE LKEMLLKKYS GCLSRLRSEF LKKRKKGKLP KDARLALMDW WNTHYRWPYP 240 TEEDKVRLAA MTGLDPKQIN NWFINQRKRH WKPSEDMRFA LMEGVTGGGG SSSGTTLYFD 300 TGTIGP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 206 | 215 | LRSEFLKKRK |
2 | 212 | 216 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23380.1 | 2e-79 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG012960.2 |