PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012960.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 312aa MW: 33842.1 Da PI: 6.1814

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	243	276	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1BG012960.1 243 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 276 59*****************************885 PP
2	ELK	33.1	1.2e-11	196	217	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1BG012960.1 196 ELKEMLLKKYSGCLSRLRSEFL 217 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
RGGRRSMEDL YSIHPGISRG GEGGAACSEA SGVAGGASSP PPPPPPADLT ELMKAQIAGH 60 PRYPSLLSAY IECRKVGAPP EVAALLEEIG QPERRGGGAT ATGEIGLDPE LDEFMVAYCR 120 LLSRYKEELS RPLDEAASFL TTIRSQLTNL CGGGATATSP HSDEMVGSSE DEPCSGDVDG 180 SDAGMQEHSS RLADHELKEM LLKKYSGCLS RLRSEFLKKR KKGKLPKDAR LALMDWWNTH 240 YRWPYPTEED KVRLAAMTGL DPKQINNWFI NQRKRHWKPS EDMRFALMEG VTGGGGSSSG 300 TTLYFDTGTI GP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	212	221	LRSEFLKKRK
2	218	222	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	6e-80	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012960.1