PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG012940.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 153aa MW: 17477.7 Da PI: 7.4414 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.6 | 2.9e-10 | 85 | 117 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ rq+ +WF N+R ++ TRIDC1BG012940.3 85 PYPTEEDKVRLAAMTGLDPRQINNWFVNQRKRH 117 8*****************************885 PP | |||||||
2 | ELK | 35.8 | 1.8e-12 | 37 | 58 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 EL+++Ll+KYsg+L+ L++EF+ TRIDC1BG012940.3 37 ELREMLLNKYSGCLSHLRTEFL 58 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MMQDEMVESS EDEPCSGDTG ASDAGMQEQS SRLANRELRE MLLNKYSGCL SHLRTEFLKK 60 RKKGKLPKDA RLALIDWWNT HYRWPYPTEE DKVRLAAMTG LDPRQINNWF VNQRKRHWKP 120 SEDMRFALTE GVAGGEGGSS SSTALCFGTD SMR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 62 | LRTEFLKKRK |
2 | 59 | 63 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.2 | 6e-38 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG012940.3 |