PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 272aa MW: 30139.1 Da PI: 6.3706

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.9	9.8e-10	204	236	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ rq+ +WF N+R ++ TRIDC1BG012940.1 204 PYPTEEDKVRLAAMTGLDPRQINNWFVNQRKRH 236 8*****************************885 PP
2	ELK	34.7	4e-12	156	177	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 EL+++Ll+KYsg+L+ L++EF+ TRIDC1BG012940.1 156 ELREMLLNKYSGCLSHLRTEFL 177 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
PPPPPADLTE LMKAQIAGHR RYPSLLSAYI ECRKVGAPPE VASLLEEIGR PVRRGGGAAA 60 AAEEIGLDPE LDEFMEAYCR LLSQYKEELS RPLDGAASLL TTIRWQLTKL CGGGATATSP 120 HSDEMVESSE DEPCSGDTGA SDAGMQEQSS RLANRELREM LLNKYSGCLS HLRTEFLKKR 180 KKGKLPKDAR LALIDWWNTH YRWPYPTEED KVRLAAMTGL DPRQINNWFV NQRKRHWKPS 240 EDMRFALTEG VAGGEGGSSS STALCFGTDS MR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	181	LRTEFLKKRK
2	178	182	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-76	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012940.1