PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1556aa MW: 166591 Da PI: 6.2465

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.9e-09	599	641	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.6 599 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 641 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1556 aa Download sequence
RRESRSDAAD AAGAGPLSAR QSATAGAASE KNAPSQSAAV ADSQSAEEET PRKKPRLGWG 60 QGLAKYEKQK VPGSSESAEP VAEGSPDGVE QKEVVGAPAP ALCASPVAAP SSPPAAPALC 120 ASPVAAPALP SFAPPSSSPV PEDKSCELTA NTVTMSSKDI PGAEVQAYND EIPIKLGQLD 180 GDRIGSLANV LAELLQHEDS CSGDSRRLTN SSKLLLLKEN IARELEKTEL EIDSLECELK 240 SVSTESENKA LEDAENPSPS SGTSKILAKP ATSKVLAKPE TSKVLAKPEI CGTSSSPKEQ 300 GVLTPCKLPV EQEADANGVD LMDVVTAPVR SVTAVSSGES VACPGVVAEA EVAVAADVAP 360 LKPSEGTGSQ IDAHCPRQEP SLSHDNVSSM KADGSNALST RQCSHRIDSR NLIPSIIAVN 420 NDIAKEFNEL VFKPLPAGQP CLGLSSQMKN DLSVRKKLGI HKNRLRFKEQ ALTFKFKVLR 480 HLWKEDVRLL SVRKQRPKSN KRTDQSNRAS QSGSQRQRSS IRSRLGMPAG NLSTFPTTEI 540 SDVANKMFTE FQFKRCRNYL KMPALIIDEK EKESASFVSK NGLIEDPVSV EKERSVINPW 600 THEEKEVFMQ MLASFGKNFS KISNFLQHKT TADCVEFYYK HHKSDSFREV KKLLDLRQQQ 660 PTGNYLGTKS GKKWNPENAA SLDMLGNAAS VVAAHGLDYA NRVEKDTEKS IIRTSCKSDV 720 SAVAKGSLDK DGIANVSLHE RESVAADVLA GICGTLSPEG MGSCITSSAD HGQKIGATRM 780 EYLIATPEAD KSFDEEDDLS DQECEVDSVD WNDNEKSLFI EALNNHGKDF ARISSYVKSK 840 SYEQCKVFFS KARISLGLDL IYQQTTDTGL PTGDASGGRS DTDEACAAEM DSPICSTQSP 900 VEMEMEVCPS ADKTLQGHLL SGITFKQSET DRSDGPEIVD LTIEEGEIKA DDTNNCNIPV 960 DHRQSSEATH QSTPSCAPID INSSESTGSM ENREHSNQVS VHGNGAMASS TEQPVGAHLE 1020 ISSSLHIVEV IEPSKASEKI CIQVSSREHA PESGAPISAG NLTTPVFLPG VIQSSNVYEG 1080 ICTKESSVEG PSQQAPLSAH MKAGNLTLSV CLPGEHCSKV SSNEGPSKHA PESAHVKAGN 1140 STPSVCLPGE SGSKENVAHF SDMAGVSCIR PAFTLSYQQS VPTDLLPAKP KSHVTPLTPK 1200 DLMPVQFSSD LPDPTSIRFE GIASITSPNF GDHANRVSNT PGPKDMSKFP VFNEQSRSQH 1260 DVLFRNIDGY LQHRRNHHLA VDIPAFSDST VSGSVGISHP DQFTITKYQN GRSGSSGLSS 1320 TSAGFLMNGS SKELREGQLK PCSHKASTES CDQVKRPGDV KLFGKILSHQ SSLQSSGSSS 1380 NVTRSKPPPP TTAAGLLGSG MDRMVYSSRP TNTAHFGQDE RVVRSYTHLD GSTVQPESSL 1440 FRVAKCQRSS LASVPFYSAK NGTLGVLAEY QQPLRQQLPS DPKRLESYAD LQKRNGIELI 1500 SGFQQQQPGK AARLGGAGIL VSPVSDPVAA LKAQYGSSSK FLGKDADHPW KDIGNR

Sequence ? help Back to Top

Protein Sequence Length: 1556 aa Download sequence

RRESRSDAAD AAGAGPLSAR QSATAGAASE KNAPSQSAAV ADSQSAEEET PRKKPRLGWG  60
QGLAKYEKQK VPGSSESAEP VAEGSPDGVE QKEVVGAPAP ALCASPVAAP SSPPAAPALC  120
ASPVAAPALP SFAPPSSSPV PEDKSCELTA NTVTMSSKDI PGAEVQAYND EIPIKLGQLD  180
GDRIGSLANV LAELLQHEDS CSGDSRRLTN SSKLLLLKEN IARELEKTEL EIDSLECELK  240
SVSTESENKA LEDAENPSPS SGTSKILAKP ATSKVLAKPE TSKVLAKPEI CGTSSSPKEQ  300
GVLTPCKLPV EQEADANGVD LMDVVTAPVR SVTAVSSGES VACPGVVAEA EVAVAADVAP  360
LKPSEGTGSQ IDAHCPRQEP SLSHDNVSSM KADGSNALST RQCSHRIDSR NLIPSIIAVN  420
NDIAKEFNEL VFKPLPAGQP CLGLSSQMKN DLSVRKKLGI HKNRLRFKEQ ALTFKFKVLR  480
HLWKEDVRLL SVRKQRPKSN KRTDQSNRAS QSGSQRQRSS IRSRLGMPAG NLSTFPTTEI  540
SDVANKMFTE FQFKRCRNYL KMPALIIDEK EKESASFVSK NGLIEDPVSV EKERSVINPW  600
THEEKEVFMQ MLASFGKNFS KISNFLQHKT TADCVEFYYK HHKSDSFREV KKLLDLRQQQ  660
PTGNYLGTKS GKKWNPENAA SLDMLGNAAS VVAAHGLDYA NRVEKDTEKS IIRTSCKSDV  720
SAVAKGSLDK DGIANVSLHE RESVAADVLA GICGTLSPEG MGSCITSSAD HGQKIGATRM  780
EYLIATPEAD KSFDEEDDLS DQECEVDSVD WNDNEKSLFI EALNNHGKDF ARISSYVKSK  840
SYEQCKVFFS KARISLGLDL IYQQTTDTGL PTGDASGGRS DTDEACAAEM DSPICSTQSP  900
VEMEMEVCPS ADKTLQGHLL SGITFKQSET DRSDGPEIVD LTIEEGEIKA DDTNNCNIPV  960
DHRQSSEATH QSTPSCAPID INSSESTGSM ENREHSNQVS VHGNGAMASS TEQPVGAHLE  1020
ISSSLHIVEV IEPSKASEKI CIQVSSREHA PESGAPISAG NLTTPVFLPG VIQSSNVYEG  1080
ICTKESSVEG PSQQAPLSAH MKAGNLTLSV CLPGEHCSKV SSNEGPSKHA PESAHVKAGN  1140
STPSVCLPGE SGSKENVAHF SDMAGVSCIR PAFTLSYQQS VPTDLLPAKP KSHVTPLTPK  1200
DLMPVQFSSD LPDPTSIRFE GIASITSPNF GDHANRVSNT PGPKDMSKFP VFNEQSRSQH  1260
DVLFRNIDGY LQHRRNHHLA VDIPAFSDST VSGSVGISHP DQFTITKYQN GRSGSSGLSS  1320
TSAGFLMNGS SKELREGQLK PCSHKASTES CDQVKRPGDV KLFGKILSHQ SSLQSSGSSS  1380
NVTRSKPPPP TTAAGLLGSG MDRMVYSSRP TNTAHFGQDE RVVRSYTHLD GSTVQPESSL  1440
FRVAKCQRSS LASVPFYSAK NGTLGVLAEY QQPLRQQLPS DPKRLESYAD LQKRNGIELI  1500
SGFQQQQPGK AARLGGAGIL VSPVSDPVAA LKAQYGSSSK FLGKDADHPW KDIGNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	3e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.6