PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1710aa MW: 183968 Da PI: 6.6268

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.5e-09	724	766	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.5 724 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 766 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1710 aa Download sequence
YRQGAGTYDR SYPDEPLGYT PSRSDRYWLE EDPPTGYKGF SRYGGGGGRR DGRDLRGSYR 60 RSPFRSYGGD FPRGHQEPPP PPPSRRSPLR SVAVPICYDP PSDRADREDR EHQPRATPWR 120 PLRRRESRSD AADAAGAGPL SARQSATAGA ASEKNAPSQS AAVADSQSAE EETPRKKPRL 180 GWGQGLAKYE KQKVPGSSES AEPVAEGSPD GVEQKEVVGA PAPALCASPV AAPSSPPAAP 240 ALCASPVAAP ALPSFAPPSS SPAAVPEDKS CELTANTVTM SSKDIPGAEV QAYNDEIPIK 300 LGQLDGDRIG SLANVLAELL QHEDSCSGDS RRLTNSSKLL LLKENIAREL EKTELEIDSL 360 ECELKSVSTE SENKALEDAE NPSPSSGTSK ILAKPATSKV LAKPETSKVL AKPEICGTSS 420 SPKEQGVLTP CKLPVEQEAD ANGVDLMDVV TAPVRSVTAV SSGESVACPG VVAEAEVAVA 480 ADVAPLKPSE GTGSQIDAHC PRQEPSLSHD NVSSMKADGS NALSTRQCSH RIDSRNLIPS 540 IIAVNNDIAK EFNELVFKPL PAGQPCLGLS SQMKNDLSVR KKLGIHKNRL RFKEQALTFK 600 FKVLRHLWKE DVRLLSVRKQ RPKSNKRTDQ SNRASQSGSQ RQRSSIRSRL GMPAGNLSTF 660 PTTEISDVAN KMFTEFQFKR CRNYLKMPAL IIDEKEKESA SFVSKNGLIE DPVSVEKERS 720 VINPWTHEEK EVFMQMLASF GKNFSKISNF LQHKTTADCV EFYYKHHKSD SFREVKKLLD 780 LRQQQPTGNY LGTKSGKKWN PENAASLDML GNAASVVAAH GLDYANRVEK DTEKSIIRTS 840 CKSDVSAVAK GSLDKDGIAN VSLHERESVA ADVLAGICGT LSPEGMGSCI TSSADHGQKI 900 GATRMEYLIA TPEADKSFDE EDDLSDQECE VDSVDWNDNE KSLFIEALNN HGKDFARISS 960 YVKSKSYEQC KVFFSKARIS LGLDLIYQQT TDTGLPTGDA SGGRSDTDEA CAAEMDSPIC 1020 STQSPVEMEM EVCPSADKTL QGHLLSGITF KQSETDRSDG PEIVDLTIEE GEIKADDTNN 1080 CNIPVDHRQS SEATHQSTPS CAPIDINSSE STGSMENREH SNQVSVHGNG AMASSTEQPV 1140 GAHLEISSSL HIVEVIEPSK ASEKICIQVS SREHAPESGA PISAGNLTTP VFLPGVIQSS 1200 NVYEGICTKE SSVEGPSQQA PLSAHMKAGN LTLSVCLPGE HCSKVSSNEG PSKHAPESAH 1260 VKAGNSTPSV CLPGESGSKE NVAHFSDMAG VSCIRPAFTL SYQQSVPTDL LPAKPKSHVT 1320 PLTPKDLMPV QFSSDLPDPT SIRFEGIASI TSPNFGDHAN RVSNTPGPKD MSKFPVFNEQ 1380 SRSQHDVLFR NIDGYLQHRR NHHLAVDIPA FSDSTVSGSV GISHPDQFTI TKYQNGRSGS 1440 SGLSSTSAGF LMNGSSKELR EGQLKPCSHK ASTESCDQVK RPGDVKLFGK ILSHQSSLQS 1500 SGSSSNVTRS KPPPPTTAAG LLGSGMDRMV YSSRPTNTAH FGQDERVVRS YTHLDGSTVQ 1560 PESSLFRVAK CQRSSLASVP FYSAKNGTLG VLAEYQQPLR QQLPSDPKRL ESYADLQKRN 1620 GIELISGFQQ QQPGKAARLG GAGILVSPVS DPVAALKAQY GSSSKFLGKD ADHPWKDIGN 1680 RKMQIAYLAV MLDMSIIGCG PRGGRTPHAM

Sequence ? help Back to Top

Protein Sequence Length: 1710 aa Download sequence

YRQGAGTYDR SYPDEPLGYT PSRSDRYWLE EDPPTGYKGF SRYGGGGGRR DGRDLRGSYR  60
RSPFRSYGGD FPRGHQEPPP PPPSRRSPLR SVAVPICYDP PSDRADREDR EHQPRATPWR  120
PLRRRESRSD AADAAGAGPL SARQSATAGA ASEKNAPSQS AAVADSQSAE EETPRKKPRL  180
GWGQGLAKYE KQKVPGSSES AEPVAEGSPD GVEQKEVVGA PAPALCASPV AAPSSPPAAP  240
ALCASPVAAP ALPSFAPPSS SPAAVPEDKS CELTANTVTM SSKDIPGAEV QAYNDEIPIK  300
LGQLDGDRIG SLANVLAELL QHEDSCSGDS RRLTNSSKLL LLKENIAREL EKTELEIDSL  360
ECELKSVSTE SENKALEDAE NPSPSSGTSK ILAKPATSKV LAKPETSKVL AKPEICGTSS  420
SPKEQGVLTP CKLPVEQEAD ANGVDLMDVV TAPVRSVTAV SSGESVACPG VVAEAEVAVA  480
ADVAPLKPSE GTGSQIDAHC PRQEPSLSHD NVSSMKADGS NALSTRQCSH RIDSRNLIPS  540
IIAVNNDIAK EFNELVFKPL PAGQPCLGLS SQMKNDLSVR KKLGIHKNRL RFKEQALTFK  600
FKVLRHLWKE DVRLLSVRKQ RPKSNKRTDQ SNRASQSGSQ RQRSSIRSRL GMPAGNLSTF  660
PTTEISDVAN KMFTEFQFKR CRNYLKMPAL IIDEKEKESA SFVSKNGLIE DPVSVEKERS  720
VINPWTHEEK EVFMQMLASF GKNFSKISNF LQHKTTADCV EFYYKHHKSD SFREVKKLLD  780
LRQQQPTGNY LGTKSGKKWN PENAASLDML GNAASVVAAH GLDYANRVEK DTEKSIIRTS  840
CKSDVSAVAK GSLDKDGIAN VSLHERESVA ADVLAGICGT LSPEGMGSCI TSSADHGQKI  900
GATRMEYLIA TPEADKSFDE EDDLSDQECE VDSVDWNDNE KSLFIEALNN HGKDFARISS  960
YVKSKSYEQC KVFFSKARIS LGLDLIYQQT TDTGLPTGDA SGGRSDTDEA CAAEMDSPIC  1020
STQSPVEMEM EVCPSADKTL QGHLLSGITF KQSETDRSDG PEIVDLTIEE GEIKADDTNN  1080
CNIPVDHRQS SEATHQSTPS CAPIDINSSE STGSMENREH SNQVSVHGNG AMASSTEQPV  1140
GAHLEISSSL HIVEVIEPSK ASEKICIQVS SREHAPESGA PISAGNLTTP VFLPGVIQSS  1200
NVYEGICTKE SSVEGPSQQA PLSAHMKAGN LTLSVCLPGE HCSKVSSNEG PSKHAPESAH  1260
VKAGNSTPSV CLPGESGSKE NVAHFSDMAG VSCIRPAFTL SYQQSVPTDL LPAKPKSHVT  1320
PLTPKDLMPV QFSSDLPDPT SIRFEGIASI TSPNFGDHAN RVSNTPGPKD MSKFPVFNEQ  1380
SRSQHDVLFR NIDGYLQHRR NHHLAVDIPA FSDSTVSGSV GISHPDQFTI TKYQNGRSGS  1440
SGLSSTSAGF LMNGSSKELR EGQLKPCSHK ASTESCDQVK RPGDVKLFGK ILSHQSSLQS  1500
SGSSSNVTRS KPPPPTTAAG LLGSGMDRMV YSSRPTNTAH FGQDERVVRS YTHLDGSTVQ  1560
PESSLFRVAK CQRSSLASVP FYSAKNGTLG VLAEYQQPLR QQLPSDPKRL ESYADLQKRN  1620
GIELISGFQQ QQPGKAARLG GAGILVSPVS DPVAALKAQY GSSSKFLGKD ADHPWKDIGN  1680
RKMQIAYLAV MLDMSIIGCG PRGGRTPHAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	5e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.5