PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1712aa MW: 184263 Da PI: 6.5886

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.5e-09	726	768	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.4 726 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 768 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1712 aa Download sequence
SEGYYRQGAG TYDRSYPDEP LGYTPSRSDR YWLEEDPPTG YKGFSRYGGG GGRRDGRDLR 60 GSYRRSPFRS YGGDFPRGHQ EPPPPPPSRR SPLRSVAVPI CYDPPSDRAD REDREHQPRA 120 TPWRPLRRRE SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK 180 KPRLGWGQGL AKYEKQKVPG SSESAEPVAE GSPDGVEQKE VVGAPAPALC ASPVAAPSSP 240 PAAPALCASP VAAPALPSFA PPSSSPVPED KSCELTANTV TMSSKDIPGA EVQAYNDEIP 300 IKLGQLDGDR IGSLANVLAE LLQHEDSCSG DSRRLTNSSK LLLLKENIAR ELEKTELEID 360 SLECELKSVS TESENKALED AENPSPSSGT SKILAKPATS KVLAKPETSK VLAKPEICGT 420 SSSPKEQGVL TPCKLPVEQE ADANGVDLMD VVTAPVRSVT AVSSGESVAC PGVVAEAEVA 480 VAADVAPLKP SEGTGSQIDA HCPRQEPSLS HDNVSSMKAD GSNALSTRQC SHRIDSRNLI 540 PSIIAVNNDI AKEFNELVFK PLPAGQPCLG LSSQMKNDLS VRKKLGIHKN RLRFKEQALT 600 FKFKVLRHLW KEDVRLLSVR KQRPKSNKRT DQSNRASQSG SQRQRSSIRS RLGMPAGNLS 660 TFPTTEISDV ANKMFTEFQF KRCRNYLKMP ALIIDEKEKE SASFVSKNGL IEDPVSVEKE 720 RSVINPWTHE EKEVFMQMLA SFGKNFSKIS NFLQHKTTAD CVEFYYKHHK SDSFREVKKL 780 LDLRQQQPTG NYLGTKSGKK WNPENAASLD MLGNAASVVA AHGLDYANRV EKDTEKSIIR 840 TSCKSDVSAV AKGSLDKDGI ANVSLHERES VAADVLAGIC GTLSPEGMGS CITSSADHGQ 900 KIGATRMEYL IATPEADKSF DEEDDLSDQE CEVDSVDWND NEKSLFIEAL NNHGKDFARI 960 SSYVKSKSYE QCKVFFSKAR ISLGLDLIYQ QTTDTGLPTG DASGGRSDTD EACAAEMDSP 1020 ICSTQSPVEM EMEVCPSADK TLQGHLLSGI TFKQSETDRS DGPEIVDLTI EEGEIKADDT 1080 NNCNIPVDHR QSSEATHQST PSCAPIDINS SESTGSMENR EHSNQVSVHG NGAMASSTEQ 1140 PVGAHLEISS SLHIVEVIEP SKASEKICIQ VSSREHAPES GAPISAGNLT TPVFLPGVIQ 1200 SSNVYEGICT KESSVEGPSQ QAPLSAHMKA GNLTLSVCLP GEHCSKVSSN EGPSKHAPES 1260 AHVKAGNSTP SVCLPGESGS KENVAHFSDM AGVSCIRPAF TLSYQQSVPT DLLPAKPKSH 1320 VTPLTPKDLM PVQFSSDLPD PTSIRFEGIA SITSPNFGDH ANRVSNTPGP KDMSKFPVFN 1380 EQSRSQHDVL FRNIDGYLQH RRNHHLAVDI PAFSDSTVSG SVGISHPDQF TITKYQNGRS 1440 GSSGLSSTSA GFLMNGSSKE LREGQLKPCS HKASTESCDQ VKRPGDVKLF GKILSHQSSL 1500 QSSGSSSNVT RSKPPPPTTA AGLLGSGMDR MVYSSRPTNT AHFGQDERVV RSYTHLDGST 1560 VQPESSLFRV AKCQRSSLAS VPFYSAKNGT LGVLAEYQQP LRQQLPSDPK RLESYADLQK 1620 RNGIELISGF QQQQPGKAAR LGGAGILVSP VSDPVAALKA QYGSSSKFLG KDADHPWKDI 1680 GNRKMQIAYL AVMLDMSIIG CGPRGGRTPH AM

Sequence ? help Back to Top

Protein Sequence Length: 1712 aa Download sequence

SEGYYRQGAG TYDRSYPDEP LGYTPSRSDR YWLEEDPPTG YKGFSRYGGG GGRRDGRDLR  60
GSYRRSPFRS YGGDFPRGHQ EPPPPPPSRR SPLRSVAVPI CYDPPSDRAD REDREHQPRA  120
TPWRPLRRRE SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK  180
KPRLGWGQGL AKYEKQKVPG SSESAEPVAE GSPDGVEQKE VVGAPAPALC ASPVAAPSSP  240
PAAPALCASP VAAPALPSFA PPSSSPVPED KSCELTANTV TMSSKDIPGA EVQAYNDEIP  300
IKLGQLDGDR IGSLANVLAE LLQHEDSCSG DSRRLTNSSK LLLLKENIAR ELEKTELEID  360
SLECELKSVS TESENKALED AENPSPSSGT SKILAKPATS KVLAKPETSK VLAKPEICGT  420
SSSPKEQGVL TPCKLPVEQE ADANGVDLMD VVTAPVRSVT AVSSGESVAC PGVVAEAEVA  480
VAADVAPLKP SEGTGSQIDA HCPRQEPSLS HDNVSSMKAD GSNALSTRQC SHRIDSRNLI  540
PSIIAVNNDI AKEFNELVFK PLPAGQPCLG LSSQMKNDLS VRKKLGIHKN RLRFKEQALT  600
FKFKVLRHLW KEDVRLLSVR KQRPKSNKRT DQSNRASQSG SQRQRSSIRS RLGMPAGNLS  660
TFPTTEISDV ANKMFTEFQF KRCRNYLKMP ALIIDEKEKE SASFVSKNGL IEDPVSVEKE  720
RSVINPWTHE EKEVFMQMLA SFGKNFSKIS NFLQHKTTAD CVEFYYKHHK SDSFREVKKL  780
LDLRQQQPTG NYLGTKSGKK WNPENAASLD MLGNAASVVA AHGLDYANRV EKDTEKSIIR  840
TSCKSDVSAV AKGSLDKDGI ANVSLHERES VAADVLAGIC GTLSPEGMGS CITSSADHGQ  900
KIGATRMEYL IATPEADKSF DEEDDLSDQE CEVDSVDWND NEKSLFIEAL NNHGKDFARI  960
SSYVKSKSYE QCKVFFSKAR ISLGLDLIYQ QTTDTGLPTG DASGGRSDTD EACAAEMDSP  1020
ICSTQSPVEM EMEVCPSADK TLQGHLLSGI TFKQSETDRS DGPEIVDLTI EEGEIKADDT  1080
NNCNIPVDHR QSSEATHQST PSCAPIDINS SESTGSMENR EHSNQVSVHG NGAMASSTEQ  1140
PVGAHLEISS SLHIVEVIEP SKASEKICIQ VSSREHAPES GAPISAGNLT TPVFLPGVIQ  1200
SSNVYEGICT KESSVEGPSQ QAPLSAHMKA GNLTLSVCLP GEHCSKVSSN EGPSKHAPES  1260
AHVKAGNSTP SVCLPGESGS KENVAHFSDM AGVSCIRPAF TLSYQQSVPT DLLPAKPKSH  1320
VTPLTPKDLM PVQFSSDLPD PTSIRFEGIA SITSPNFGDH ANRVSNTPGP KDMSKFPVFN  1380
EQSRSQHDVL FRNIDGYLQH RRNHHLAVDI PAFSDSTVSG SVGISHPDQF TITKYQNGRS  1440
GSSGLSSTSA GFLMNGSSKE LREGQLKPCS HKASTESCDQ VKRPGDVKLF GKILSHQSSL  1500
QSSGSSSNVT RSKPPPPTTA AGLLGSGMDR MVYSSRPTNT AHFGQDERVV RSYTHLDGST  1560
VQPESSLFRV AKCQRSSLAS VPFYSAKNGT LGVLAEYQQP LRQQLPSDPK RLESYADLQK  1620
RNGIELISGF QQQQPGKAAR LGGAGILVSP VSDPVAALKA QYGSSSKFLG KDADHPWKDI  1680
GNRKMQIAYL AVMLDMSIIG CGPRGGRTPH AM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	5e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.4