PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1685aa MW: 181304 Da PI: 6.4943

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.4e-09	728	770	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.3 728 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 770 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1685 aa Download sequence
SEGYYRQGAG TYDRSYPDEP LGYTPSRSDR YWLEEDPPTG YKGFSRYGGG GGRRDGRDLR 60 GSYRRSPFRS YGGDFPRGHQ EPPPPPPSRR SPLRSVAVPI CYDPPSDRAD REDREHQPRA 120 TPWRPLRRRE SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK 180 KPRLGWGQGL AKYEKQKVPG SSESAEPVAE GSPDGVEQKE VVGAPAPALC ASPVAAPSSP 240 PAAPALCASP VAAPALPSFA PPSSSPAAVP EDKSCELTAN TVTMSSKDIP GAEVQAYNDE 300 IPIKLGQLDG DRIGSLANVL AELLQHEDSC SGDSRRLTNS SKLLLLKENI ARELEKTELE 360 IDSLECELKS VSTESENKAL EDAENPSPSS GTSKILAKPA TSKVLAKPET SKVLAKPEIC 420 GTSSSPKEQG VLTPCKLPVE QEADANGVDL MDVVTAPVRS VTAVSSGESV ACPGVVAEAE 480 VAVAADVAPL KPSEGTGSQI DAHCPRQEPS LSHDNVSSMK ADGSNALSTR QCSHRIDSRN 540 LIPSIIAVNN DIAKEFNELV FKPLPAGQPC LGLSSQMKND LSVRKKLGIH KNRLRFKEQA 600 LTFKFKVLRH LWKEDVRLLS VRKQRPKSNK RTDQSNRASQ SGSQRQRSSI RSRLGMPAGN 660 LSTFPTTEIS DVANKMFTEF QFKRCRNYLK MPALIIDEKE KESASFVSKN GLIEDPVSVE 720 KERSVINPWT HEEKEVFMQM LASFGKNFSK ISNFLQHKTT ADCVEFYYKH HKSDSFREVK 780 KLLDLRQQQP TGNYLGTKSG KKWNPENAAS LDMLGNAASV VAAHGLDYAN RVEKDTEKSI 840 IRTSCKSDVS AVAKGSLDKD GIANVSLHER ESVAADVLAG ICGTLSPEGM GSCITSSADH 900 GQKIGATRME YLIATPEADK SFDEEDDLSD QECEVDSVDW NDNEKSLFIE ALNNHGKDFA 960 RISSYVKSKS YEQCKVFFSK ARISLGLDLI YQQTTDTGLP TGDASGGRSD TDEACAAEMD 1020 SPICSTQSPV EMEMEVCPSA DKTLQGHLLS GITFKQSETD RSDGPEIVDL TIEEGEIKAD 1080 DTNNCNIPVD HRQSSEATHQ STPSCAPIDI NSSESTGSME NREHSNQVSV HGNGAMASST 1140 EQPVGAHLEI SSSLHIVEVI EPSKASEKIC IQVSSREHAP ESGAPISAGN LTTPVFLPGV 1200 IQSSNVYEGI CTKESSVEGP SQQAPLSAHM KAGNLTLSVC LPGEHCSKVS SNEGPSKHAP 1260 ESAHVKAGNS TPSVCLPGES GSKENVAHFS DMAGVSCIRP AFTLSYQQSV PTDLLPAKPK 1320 SHVTPLTPKD LMPVQFSSDL PDPTSIRFEG IASITSPNFG DHANRVSNTP GPKDMSKFPV 1380 FNEQSRSQHD VLFRNIDGYL QHRRNHHLAV DIPAFSDSTV SGSVGISHPD QFTITKYQNG 1440 RSGSSGLSST SAGFLMNGSS KELREGQLKP CSHKASTESC DQVKRPGDVK LFGKILSHQS 1500 SLQSSGSSSN VTRSKPPPPT TAAGLLGSGM DRMVYSSRPT NTAHFGQDER VVRSYTHLDG 1560 STVQPESSLF RVAKCQRSSL ASVPFYSAKN GTLGVLAEYQ QPLRQQLPSD PKRLESYADL 1620 QKRNGIELIS GFQQQQPGKA ARLGGAGILV SPVSDPVAAL KAQYGSSSKF LGKDADHPWK 1680 DIGNR

Sequence ? help Back to Top

Protein Sequence Length: 1685 aa Download sequence

SEGYYRQGAG TYDRSYPDEP LGYTPSRSDR YWLEEDPPTG YKGFSRYGGG GGRRDGRDLR  60
GSYRRSPFRS YGGDFPRGHQ EPPPPPPSRR SPLRSVAVPI CYDPPSDRAD REDREHQPRA  120
TPWRPLRRRE SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK  180
KPRLGWGQGL AKYEKQKVPG SSESAEPVAE GSPDGVEQKE VVGAPAPALC ASPVAAPSSP  240
PAAPALCASP VAAPALPSFA PPSSSPAAVP EDKSCELTAN TVTMSSKDIP GAEVQAYNDE  300
IPIKLGQLDG DRIGSLANVL AELLQHEDSC SGDSRRLTNS SKLLLLKENI ARELEKTELE  360
IDSLECELKS VSTESENKAL EDAENPSPSS GTSKILAKPA TSKVLAKPET SKVLAKPEIC  420
GTSSSPKEQG VLTPCKLPVE QEADANGVDL MDVVTAPVRS VTAVSSGESV ACPGVVAEAE  480
VAVAADVAPL KPSEGTGSQI DAHCPRQEPS LSHDNVSSMK ADGSNALSTR QCSHRIDSRN  540
LIPSIIAVNN DIAKEFNELV FKPLPAGQPC LGLSSQMKND LSVRKKLGIH KNRLRFKEQA  600
LTFKFKVLRH LWKEDVRLLS VRKQRPKSNK RTDQSNRASQ SGSQRQRSSI RSRLGMPAGN  660
LSTFPTTEIS DVANKMFTEF QFKRCRNYLK MPALIIDEKE KESASFVSKN GLIEDPVSVE  720
KERSVINPWT HEEKEVFMQM LASFGKNFSK ISNFLQHKTT ADCVEFYYKH HKSDSFREVK  780
KLLDLRQQQP TGNYLGTKSG KKWNPENAAS LDMLGNAASV VAAHGLDYAN RVEKDTEKSI  840
IRTSCKSDVS AVAKGSLDKD GIANVSLHER ESVAADVLAG ICGTLSPEGM GSCITSSADH  900
GQKIGATRME YLIATPEADK SFDEEDDLSD QECEVDSVDW NDNEKSLFIE ALNNHGKDFA  960
RISSYVKSKS YEQCKVFFSK ARISLGLDLI YQQTTDTGLP TGDASGGRSD TDEACAAEMD  1020
SPICSTQSPV EMEMEVCPSA DKTLQGHLLS GITFKQSETD RSDGPEIVDL TIEEGEIKAD  1080
DTNNCNIPVD HRQSSEATHQ STPSCAPIDI NSSESTGSME NREHSNQVSV HGNGAMASST  1140
EQPVGAHLEI SSSLHIVEVI EPSKASEKIC IQVSSREHAP ESGAPISAGN LTTPVFLPGV  1200
IQSSNVYEGI CTKESSVEGP SQQAPLSAHM KAGNLTLSVC LPGEHCSKVS SNEGPSKHAP  1260
ESAHVKAGNS TPSVCLPGES GSKENVAHFS DMAGVSCIRP AFTLSYQQSV PTDLLPAKPK  1320
SHVTPLTPKD LMPVQFSSDL PDPTSIRFEG IASITSPNFG DHANRVSNTP GPKDMSKFPV  1380
FNEQSRSQHD VLFRNIDGYL QHRRNHHLAV DIPAFSDSTV SGSVGISHPD QFTITKYQNG  1440
RSGSSGLSST SAGFLMNGSS KELREGQLKP CSHKASTESC DQVKRPGDVK LFGKILSHQS  1500
SLQSSGSSSN VTRSKPPPPT TAAGLLGSGM DRMVYSSRPT NTAHFGQDER VVRSYTHLDG  1560
STVQPESSLF RVAKCQRSSL ASVPFYSAKN GTLGVLAEYQ QPLRQQLPSD PKRLESYADL  1620
QKRNGIELIS GFQQQQPGKA ARLGGAGILV SPVSDPVAAL KAQYGSSSKF LGKDADHPWK  1680
DIGNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	5e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.3