PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1639aa MW: 177399 Da PI: 6.652

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.2e-09	758	800	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.1 758 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 800 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1639 aa Download sequence
MPPPPPDRRE FLYRDGRRHD AAAGDPLLPA PPATPRWRDS PYHPPPPPPP PLRDHARPSP 60 RRTASSASSE GYYRQGAGTY DRSYPDEPLG YTPSRSDRYW LEEDPPTGYK GFSRYGGGGG 120 RRDGRDLRGS YRRSPFRSYG GDFPRGHQEP PPPPPSRRSP LRSVAVPICY DPPSDRADRE 180 DREHQPRATP WRPLRRRESR SDAADAAGAG PLSARQSATA GAASEKNAPS QSAAVADSQS 240 AEEETPRKKP RLGWGQGLAK YEKQKVPGSS ESAEPVAEGS PDGVEQKEVV GAPAPALCAS 300 PVAAPSSPPA APALSAVPED KSCELTANTV TMSSKDIPGA EVQAYNDEIP IKLGQLDGDR 360 IGSLANVLAE LLQHEDSCSG DSRRLTNSSK LLLLKENIAR ELEKTELEID SLECELKSVS 420 TESENKALED AENPSPSSGT SKVLAKPEIC GTSSSPKEQG VLTPCKLPVE QEADANGVDL 480 MDVVTAPVRS VTAVSSGESV ACPGVVAEAE VAVAADVAPL KPSEGTGSQI DAHCPRQEPS 540 LSHDNVSSMK ADGSNALSTR QCSHRIDSRN LIPSIIAVNN DIAKEFNELV FKPLPAGQPC 600 LGLSSQMKND LSVRKKLGIH KNRLRFKEQA LTFKFKVLRH LWKEDVRLLS VRKQRPKSNK 660 RTDQSNRASQ SGSQRQRSSI RSRLGMPAGN LSTFPTTEIS DVANKMFTEF QFKRCRNYLK 720 MPALIIDEKE KESASFVSKN GLIEDPVSVE KERSVINPWT HEEKEVFMQM LASFGKNFSK 780 ISNFLQHKTT ADCVEFYYKH HKSDSFREVK KLLDLRQQQP TGNYLGTKSG KKWNPENAAS 840 LDMLGNAASV VAAHGLDYAN RVEKDTEKSI IRTSCKSDVS AVAKGSLDKD GIANVSLHER 900 ESVAADVLAG ICGTLSPEGM GSCITSSADH GQKIGATRME YLIATPEADK SFDEEDDLSD 960 QECEVDSVDW NDNEKSLFIE ALNNHGKDFA RISSYVKSKS YEQCKVFFSK ARISLGLDLI 1020 YQQTTDTGLP TGDASGGRSD TDEACAAEMD SPICSTQSPV EMEMEVCPSA DKTLQGHLLS 1080 GITFKQSETD RSDGPEIVDL TIEEGEIKAD DTNNCNIPVD HRQSSEATHQ STPSCAPIDI 1140 NSSESTGSME NREHSNQVSV HGNGAMASST EQPVGAHLEI SSSLHIVEVI EPSKASEKIC 1200 IKVSSNEGPS KHAPESAHVK AGNSTPSVCL PGESGSKENV AHFSDMAGVS CIRPAFTLSY 1260 QQSVPTDLLP AKPKSHVTPL TPKDLMPVQF SSDLPDPTSI RFEGIASITS PNFGDHANRV 1320 SNTPGPKDMS KFPVFNEQSR SQHDVLFRNI DGYLQHRRNH HLAVDIPAFS DSTVSGSVGI 1380 SHPDQFTITK YQNGRSGSSG LSSTSAGFLM NGSSKELREG QLKPCSHKAS TESCDQVKRP 1440 GDVKLFGKIL SHQSSLQSSG SSSNVTRSKP PPPTTAAGLL GSGMDRMVYS SRPTNTAHFG 1500 QDERVVRSYT HLDGSTVQPE SSLFRVAKCQ RSSLASVPFY SAKNGTLGVL AEYQQPLRQQ 1560 LPSDPKRLES YADLQKRNGI ELISGFQQQQ PGKAARLGGA GILVSPVSDP VAALKAQYGS 1620 SSKFLGKDAD HPWKDIGNR

Sequence ? help Back to Top

Protein Sequence Length: 1639 aa Download sequence

MPPPPPDRRE FLYRDGRRHD AAAGDPLLPA PPATPRWRDS PYHPPPPPPP PLRDHARPSP  60
RRTASSASSE GYYRQGAGTY DRSYPDEPLG YTPSRSDRYW LEEDPPTGYK GFSRYGGGGG  120
RRDGRDLRGS YRRSPFRSYG GDFPRGHQEP PPPPPSRRSP LRSVAVPICY DPPSDRADRE  180
DREHQPRATP WRPLRRRESR SDAADAAGAG PLSARQSATA GAASEKNAPS QSAAVADSQS  240
AEEETPRKKP RLGWGQGLAK YEKQKVPGSS ESAEPVAEGS PDGVEQKEVV GAPAPALCAS  300
PVAAPSSPPA APALSAVPED KSCELTANTV TMSSKDIPGA EVQAYNDEIP IKLGQLDGDR  360
IGSLANVLAE LLQHEDSCSG DSRRLTNSSK LLLLKENIAR ELEKTELEID SLECELKSVS  420
TESENKALED AENPSPSSGT SKVLAKPEIC GTSSSPKEQG VLTPCKLPVE QEADANGVDL  480
MDVVTAPVRS VTAVSSGESV ACPGVVAEAE VAVAADVAPL KPSEGTGSQI DAHCPRQEPS  540
LSHDNVSSMK ADGSNALSTR QCSHRIDSRN LIPSIIAVNN DIAKEFNELV FKPLPAGQPC  600
LGLSSQMKND LSVRKKLGIH KNRLRFKEQA LTFKFKVLRH LWKEDVRLLS VRKQRPKSNK  660
RTDQSNRASQ SGSQRQRSSI RSRLGMPAGN LSTFPTTEIS DVANKMFTEF QFKRCRNYLK  720
MPALIIDEKE KESASFVSKN GLIEDPVSVE KERSVINPWT HEEKEVFMQM LASFGKNFSK  780
ISNFLQHKTT ADCVEFYYKH HKSDSFREVK KLLDLRQQQP TGNYLGTKSG KKWNPENAAS  840
LDMLGNAASV VAAHGLDYAN RVEKDTEKSI IRTSCKSDVS AVAKGSLDKD GIANVSLHER  900
ESVAADVLAG ICGTLSPEGM GSCITSSADH GQKIGATRME YLIATPEADK SFDEEDDLSD  960
QECEVDSVDW NDNEKSLFIE ALNNHGKDFA RISSYVKSKS YEQCKVFFSK ARISLGLDLI  1020
YQQTTDTGLP TGDASGGRSD TDEACAAEMD SPICSTQSPV EMEMEVCPSA DKTLQGHLLS  1080
GITFKQSETD RSDGPEIVDL TIEEGEIKAD DTNNCNIPVD HRQSSEATHQ STPSCAPIDI  1140
NSSESTGSME NREHSNQVSV HGNGAMASST EQPVGAHLEI SSSLHIVEVI EPSKASEKIC  1200
IKVSSNEGPS KHAPESAHVK AGNSTPSVCL PGESGSKENV AHFSDMAGVS CIRPAFTLSY  1260
QQSVPTDLLP AKPKSHVTPL TPKDLMPVQF SSDLPDPTSI RFEGIASITS PNFGDHANRV  1320
SNTPGPKDMS KFPVFNEQSR SQHDVLFRNI DGYLQHRRNH HLAVDIPAFS DSTVSGSVGI  1380
SHPDQFTITK YQNGRSGSSG LSSTSAGFLM NGSSKELREG QLKPCSHKAS TESCDQVKRP  1440
GDVKLFGKIL SHQSSLQSSG SSSNVTRSKP PPPTTAAGLL GSGMDRMVYS SRPTNTAHFG  1500
QDERVVRSYT HLDGSTVQPE SSLFRVAKCQ RSSLASVPFY SAKNGTLGVL AEYQQPLRQQ  1560
LPSDPKRLES YADLQKRNGI ELISGFQQQQ PGKAARLGGA GILVSPVSDP VAALKAQYGS  1620
SSKFLGKDAD HPWKDIGNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	4e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.1