PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG010590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 175aa MW: 17451.2 Da PI: 4.2842

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG010590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	51.6	2.7e-16	40	91	49	100
DUF260 49 lpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lpee+r da+ss+vyeA arardPvyG++g i +lq+q++ lka+la++++e TRIDC1BG010590.1 40 LPEEQRADAVSSMVYEAAARARDPVYGSAGAICQLQRQVDGLKAQLARAQAE 91 799********************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
GRHGAVALVT DPDVAAGNGD GDGGGDEPVR GVQDPPPPDL PEEQRADAVS SMVYEAAARA 60 RDPVYGSAGA ICQLQRQVDG LKAQLARAQA ELAAARAHHA HLVALLCVEV ATAAATPPQD 120 AYCTGVGGSQ SQLAAPPGVG SAPTDALYTV DGSAAGGSGI MQAGHVGWAD EPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	3e-12	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG010590.1