PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010030.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 319aa    MW: 35310.3 Da    PI: 9.6893
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010030.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17655155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC1BG010030.6  6 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 55
                      78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI  60
NFNLSDYEDD MKQMKGLSKE EFVHVLRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG  120
KKAYDKAAIK CNGREAVTNF EPSTYDAELL SEVAAEGADV DLNLSISQPT SQSPKRDKSS  180
LGLQLHHGSY EGSELKRPKV DAPPEMVAIP HRYPLLTEHP PIWHGQSYPI FLNNEDAARD  240
HSRRPEVATG GVPTWAWRVS HPPPTQPMPL FSSSSSAAAS SGFSKTAAAA APGAPSASFR  300
FDPMAPSSSS SNQHHHHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-91AP2 family protein