PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG010030.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 229aa MW: 25892.1 Da PI: 9.0149 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.6 | 9.8e-16 | 1 | 47 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1BG010030.4 1 RGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 47 8*****************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNLSDYE 60 DDMKQMKGLS KEEFVHVLRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKAYDKAA 120 IKCNGREAVT NFEPSTYDAE LLSEVAAEGA DVDLNLSISQ PTSQSPKRDK SSLGLQLHHG 180 SYEGSELKRP KVDAPPEMVA IPHRYPLLTE HPPIWHGQSY PIFLNNEVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 4e-89 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG010030.4 |