PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010030.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 322aa    MW: 35695.9 Da    PI: 8.5931
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010030.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.53.3e-13121162147
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa  ++
  TRIDC1BG010030.11 121 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAASDYE 162
                        78*******************......55**********988887666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
RSSASAEGEN DVGADDDEEE ATPSPLPPPP RHYHQHLLQP QQLVTQELFP AAATAGGPPP  60
MSVPQHWAEL GFFRPAAPPP DMRILQMQQQ QLQVHAQPPP PPAAQPPVAK KSRRGPRSRS  120
SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAASD YEDDMKQMKG LSKEEFVHVL  180
RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA VTNFEPSTYD  240
AELLSEVAAE GADVDLNLSI SQPTSQSPKR DKSSLGLQLH HGSYEGSELK RPKASTNAFF  300
KRFGNQSNFT AGFVWLPDPL CD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.29e-76AP2 family protein