PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG006190.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 567aa MW: 64202.9 Da PI: 6.2394

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG006190.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.5	7.5e-11	471	537	31	99
.--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 31 eesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 ++ +tl+ ++++W+ ++ ++ ++l+++W +Fv +n++++gD+++F + ++ +++v+++r+ TRIDC1BG006190.4 471 NG--AVTLQMpGKSEKWRPRF--FIEKDNCMLAGNWLDFVCDNQVQAGDICIFVPAKGgERSTFTVHIIRA 537 33..45555534679****..66667799*******************7755599999*9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MDEVLHGEVG IRSRFSAGRI REIMRGLTPR QQGYVAKYGF EHFNRIGAFS VHEPLTEWIM 60 GKINPPFSEF RINADKTIVF SKPLVQKILG VPTGERPFVL HGQKSDKIKE LRDLYLNNGL 120 RATIPHCVSL LKNNEDEESF MRTFLLIALA AVLTPTTGNT IDLDYLWAFE DMSKVQDLDW 180 AGHITEHLMD EVQKFQYKSR EEKMRDFWVG GCLPLLTIAY MDHLDLPRGR IVDHEINYSV 240 PRICHVSKDD FQFAAIADLH RQHFKFATFG ILPFRDRTPY TDNPVTDTEV AEDDLRILSN 300 DQVLSGQWEL VEVHEERIDE LVKETQPEVL GFAEASIDRP RPGRTDIGSN QGTKKSASCE 360 RDSSSHCRNT AKAAVTPSSS EKSVEDIARE YESSESDDHP TPPEADYGVI FRSFLSGTQM 420 ERVNMLIHKI KPETIVFVAT MRKCDVQLPT PLLIISKERS LAAAAHFPHE NGAVTLQMPG 480 KSEKWRPRFF IEKDNCMLAG NWLDFVCDNQ VQAGDICIFV PAKGGERSTF TVHIIRAEAT 540 HRRGVKRVRS SHDSPVGVEG MANPDAV

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MDEVLHGEVG IRSRFSAGRI REIMRGLTPR QQGYVAKYGF EHFNRIGAFS VHEPLTEWIM  60
GKINPPFSEF RINADKTIVF SKPLVQKILG VPTGERPFVL HGQKSDKIKE LRDLYLNNGL  120
RATIPHCVSL LKNNEDEESF MRTFLLIALA AVLTPTTGNT IDLDYLWAFE DMSKVQDLDW  180
AGHITEHLMD EVQKFQYKSR EEKMRDFWVG GCLPLLTIAY MDHLDLPRGR IVDHEINYSV  240
PRICHVSKDD FQFAAIADLH RQHFKFATFG ILPFRDRTPY TDNPVTDTEV AEDDLRILSN  300
DQVLSGQWEL VEVHEERIDE LVKETQPEVL GFAEASIDRP RPGRTDIGSN QGTKKSASCE  360
RDSSSHCRNT AKAAVTPSSS EKSVEDIARE YESSESDDHP TPPEADYGVI FRSFLSGTQM  420
ERVNMLIHKI KPETIVFVAT MRKCDVQLPT PLLIISKERS LAAAAHFPHE NGAVTLQMPG  480
KSEKWRPRFF IEKDNCMLAG NWLDFVCDNQ VQAGDICIFV PAKGGERSTF TVHIIRAEAT  540
HRRGVKRVRS SHDSPVGVEG MANPDAV

Link Out ? help Back to Top
Ensembl	TRIDC1BG006190.4