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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC1AG062470.2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NF-YB | ||||||||
| Protein Properties | Length: 105aa MW: 10950.5 Da PI: 10.8887 | ||||||||
| Description | NF-YB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NF-YB | 62.4 | 9.6e-20 | 33 | 76 | 1 | 44 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefis 44
vreqdrflPian+s imkk++ an+ki+kdaket++ec+sefi+
TRIDC1AG062470.2 33 VREQDRFLPIANISSIMKKAILANGKIAKDAKETLRECISEFIA 76
69****************************************96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 105 aa Download sequence |
CADGSVGVAG VLQEGGRMSD APASPPGGGF GSVREQDRFL PIANISSIMK KAILANGKIA 60 KDAKETLREC ISEFIASSPA RRVTSARGRS ARPSTSMTCS GRWPR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G53340.1 | 4e-20 | NF-YB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC1AG062470.2 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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