PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG061580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 101aa MW: 11145.5 Da PI: 8.4633 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.8 | 2.1e-07 | 5 | 49 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+ +l+ +a + + + +W+ +a+ +g g+++ +++ ++ TRIDC1AG061580.1 5 WTPKQNKLFEQALAVHDRDtpdRWHNVAHAVGGGKSADDVRRYYE 49 *****************99************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
GRAGWTPKQN KLFEQALAVH DRDTPDRWHN VAHAVGGGKS ADDVRRYYEL LVRDVANIEA 60 GKVPFPAYRP PCPGPNVGYE ADRFVLPLTS SLGVLAYQIN S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 2e-28 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG061580.1 |