PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG061530.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 216aa MW: 23976.6 Da PI: 10.4384 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.8 | 2.5e-28 | 19 | 70 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 ++rY+eCl+NhAa+ GghavDGCgEfmps + + l+CaACgCHR+FHRr+ TRIDC1AG061530.2 19 EARYRECLRNHAAAQGGHAVDGCGEFMPS----SAHDLLRCAACGCHRSFHRRDDG 70 689*************************9....5678****************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
HAAGTPPGTR SPSSGNSGEA RYRECLRNHA AAQGGHAVDG CGEFMPSSAH DLLRCAACGC 60 HRSFHRRDDG QQQQHPRLFL PAPGATSTTP TPRVPLLMPP PQQHHHYQRT PSGGGTTTES 120 SSEEPDPGPP STSAPGQGHG QAQRRKRFRT RFTAEQREQM LALAERVGWR MLKQDEALVE 180 QLCAQAGVRR QVFKVWMHNN KHHRRQPESQ QQQQKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 3e-31 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG061530.2 |