PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG061530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ZF-HD
Protein Properties Length: 263aa    MW: 29073.2 Da    PI: 9.9439
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG061530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.43.5e-284192358
       ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                      ++rY+eCl+NhAa+ GghavDGCgEfmps    +  + l+CaACgCHR+FHRr+  
  TRIDC1AG061530.1 41 EARYRECLRNHAAAQGGHAVDGCGEFMPS----SAHDLLRCAACGCHRSFHRRDDG 92
                      689*************************9....5678****************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
RPTTCAASCS QRHAVMEFTG PEHAAGTPPG TRSPSSGNSG EARYRECLRN HAAAQGGHAV  60
DGCGEFMPSS AHDLLRCAAC GCHRSFHRRD DGQQQQHPRL FLPAPGATST TPTPRVPLLM  120
PPPQQHHHPY AAGHPQAPPF AYNPHHQHYQ RTPSGGGTTT ESSSEEPDPG PPSTSAPGQG  180
HGQAQRRKRF RTRFTAEQRE QMLALAERVG WRMLKQDEAL VEQLCAQAGV RRQVFKVWMH  240
NNKHHRRQPE SQQQQQKQGR GMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-25ZF-HD family protein